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dbVar

Database of genomic structural variation

nsv5942329

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:108

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 204 SVs from 20 studies. See in: genome view

Submitted genomic31,526,323-31,526,430

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5942329	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000018.10	Chr18	31,526,323	31,526,430
nsv5942329	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000018.9	Chr18	29,106,286	29,106,393

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17370447	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17370447	Submitted genomic		NC_000018.10:g.315 26323_31526430del	GRCh38 (hg38)		NC_000018.10	Chr18	31,526,323	31,526,430
nssv17370447	Remapped	Perfect	NC_000018.9:g.2910 6286_29106393del	GRCh37.p13	First Pass	NC_000018.9	Chr18	29,106,286	29,106,393

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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