esv3415533
- Organism: Homo sapiens
- Study:estd59 (1000 Genomes Consortium Pilot Project)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:20
- Publication(s):1000 Genomes Project Consortium et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 69 SVs from 16 studies. See in: genome view
Overlapping variant regions from other studies: 69 SVs from 16 studies. See in: genome view
Overlapping variant regions from other studies: 14 SVs from 8 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3415533 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 77,236,409 (-23, +23) | 77,236,428 (-23, +23) |
| esv3415533 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000010.10 | Chr10 | 78,996,167 (-23, +23) | 78,996,186 (-23, +23) |
| esv3415533 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000010.9 | Chr10 | 78,666,173 (-23, +23) | 78,666,192 (-23, +23) |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv9648558 | insertion | SAMN00801876 | Sequencing | Split read mapping | 1,150 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv9648558 | Remapped | Perfect | NC_000010.11:g.(77 236386_77236432)_( 77236405_77236451) ins6000 | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 77,236,409 (-23, +23) | 77,236,428 (-23, +23) |
| essv9648558 | Remapped | Perfect | NC_000010.10:g.(78 996144_78996190)_( 78996163_78996209) ins6000 | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 78,996,167 (-23, +23) | 78,996,186 (-23, +23) |
| essv9648558 | Submitted genomic | NC_000010.9:g.(786 66150_78666196)_(7 8666169_78666215)i ns6000 | NCBI36 (hg18) | NC_000010.9 | Chr10 | 78,666,173 (-23, +23) | 78,666,192 (-23, +23) |