Shigella flexneri (ID 230538) - BioProject

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Accession: PRJNA230538 ID: 230538

Shigella flexneri

Shigella flexneri Genome sequencing and assembly

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To elucidate genomic portrait of evolution and epidemic of S. flexneri , we sequenced strains isolated from China in this study.

Accession	PRJNA230538
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Shigella flexneri[Taxonomy ID: 623] Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella flexneri
Publications	Zhang N et al., "Genomic portrait of the evolution and epidemic spread of a recently emerged multidrug-resistant Shigella flexneri clone in China.", J Clin Microbiol, 2014 Apr;52(4):1119-26
Submission	Registration date: 29-Jan-2014 Chinese Center for Disease Control and Prevention (China CDC)
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	17932
WGS master	59
Publications
PubMed	1
PMC	1
Other datasets
BioSample	59
Assembly	59

Assembly details:

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Assembly level

Number of Assemblies

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Total

59
59

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_000566665.1	AZQM00000000	SAMN02437421	2002142	Shigella flexneri 2002142
GCA_000566645.1	AZQL00000000	SAMN02437420	2002141	Shigella flexneri 2002141
GCA_000566625.1	AZQK00000000	SAMN02437419	2002127	Shigella flexneri 2002127
GCA_000566605.1	AZQJ00000000	SAMN02437418	2002035	Shigella flexneri 2002035
GCA_000566585.1	AZQI00000000	SAMN02437417	2001048	Shigella flexneri 2001048
GCA_000566565.1	AZQH00000000	SAMN02437416	2001027	Shigella flexneri 2001027
GCA_000566545.1	AZQG00000000	SAMN02437415	2001025	Shigella flexneri 2001025
GCA_000566525.1	AZQF00000000	SAMN02437414	Shi06AH091	Shigella flexneri Shi06AH091
GCA_000566505.1	AZQE00000000	SAMN02437413	Shi06HN091	Shigella flexneri Shi06HN091
GCA_000566485.1	AZQD00000000	SAMN02437412	Shi06HN347	Shigella flexneri Shi06HN347
GCA_000566465.1	AZQC00000000	SAMN02437411	Shi06HN344	Shigella flexneri Shi06HN344
GCA_000566445.1	AZQB00000000	SAMN02437410	Shi06HN159	Shigella flexneri Shi06HN159
GCA_000566425.1	AZQA00000000	SAMN02437409	Shi06GS02	Shigella flexneri Shi06GS02
GCA_000566405.1	AZPZ00000000	SAMN02437408	2005GS061	Shigella flexneri 2005GS061
GCA_000566385.1	AZPY00000000	SAMN02437407	2005184	Shigella flexneri 2005184
GCA_000566365.1	AZPX00000000	SAMN02437406	2005051	Shigella flexneri 2005051
GCA_000566345.1	AZPW00000000	SAMN02437405	2005025	Shigella flexneri 2005025
GCA_000566325.1	AZPV00000000	SAMN02437404	2005002	Shigella flexneri 2005002
GCA_000566305.1	AZPU00000000	SAMN02437403	2003035	Shigella flexneri 2003035
GCA_000566285.1	AZPT00000000	SAMN02437402	2002140	Shigella flexneri 2002140
GCA_000566265.1	AZPS00000000	SAMN02437401	2002110	Shigella flexneri 2002110
GCA_000566245.1	AZPR00000000	SAMN02437400	2002106	Shigella flexneri 2002106
GCA_000566225.1	AZPQ00000000	SAMN02437399	2002091	Shigella flexneri 2002091
GCA_000566205.1	AZPP00000000	SAMN02437398	2002069	Shigella flexneri 2002069
GCA_000566185.1	AZPO00000000	SAMN02437397	2002028	Shigella flexneri 2002028
GCA_000566165.1	AZPN00000000	SAMN02437396	2002021	Shigella flexneri 2002021
GCA_000566145.1	AZPM00000000	SAMN02437395	2001044	Shigella flexneri 2001044
GCA_000566125.1	AZPL00000000	SAMN02437394	2001042	Shigella flexneri 2001042
GCA_000566105.1	AZPK00000000	SAMN02437393	2001004	Shigella flexneri 2001004
GCA_000566085.1	AZPJ00000000	SAMN02437392	2001020	Shigella flexneri 2001020
GCA_000566065.1	AZPI00000000	SAMN02437391	2000019	Shigella flexneri 2000019
GCA_000566045.1	AZPH00000000	SAMN02437390	1997005	Shigella flexneri 1997005
GCA_000566025.1	AZPG00000000	SAMN02437389	51581	Shigella flexneri 51581
GCA_000566005.1	AZPF00000000	SAMN02437388	51577	Shigella flexneri 51577
GCA_000565985.1	AZPE00000000	SAMN02437387	51576	Shigella flexneri 51576
GCA_000565965.1	AZPD00000000	SAMN02437386	51575	Shigella flexneri 51575
GCA_000565945.1	AZPC00000000	SAMN02437385	2002007	Shigella flexneri 2002007
GCA_000565925.1	AZPB00000000	SAMN02437384	Shi06SX53	Shigella flexneri Shi06SX53
GCA_000565905.1	AZPA00000000	SAMN02437383	Shi05SX04	Shigella flexneri Shi05SX04
GCA_000565885.1	AZOZ00000000	SAMN02437382	2002103	Shigella flexneri 2002103
GCA_000565865.1	AZOY00000000	SAMN02437381	Shi06SX36	Shigella flexneri Shi06SX36
GCA_000565845.1	AZOX00000000	SAMN02437380	Shi06GS55	Shigella flexneri Shi06GS55
GCA_000565825.1	AZOW00000000	SAMN02437379	Shi06AH130	Shigella flexneri Shi06AH130
GCA_000565805.1	AZOV00000000	SAMN02437378	2003055	Shigella flexneri 2003055
GCA_000565785.1	AZOU00000000	SAMN02437377	Shi06GS37	Shigella flexneri Shi06GS37
GCA_000565765.1	AZOT00000000	SAMN02437376	Shi06HN244	Shigella flexneri Shi06HN244
GCA_000565745.1	AZOS00000000	SAMN02437375	Shi06AH028	Shigella flexneri Shi06AH028
GCA_000565725.1	AZOR00000000	SAMN02437374	Shi06HN250	Shigella flexneri Shi06HN250
GCA_000565705.1	AZOQ00000000	SAMN02437373	Shi06HN016	Shigella flexneri Shi06HN016
GCA_000565685.1	AZOP00000000	SAMN02437372	Shi06HN378	Shigella flexneri Shi06HN378
GCA_000565665.1	AZOO00000000	SAMN02437371	Shi06AH135	Shigella flexneri Shi06AH135
GCA_000565645.1	AZON00000000	SAMN02437370	2005AH264	Shigella flexneri 2005AH264
GCA_000565625.1	AZOM00000000	SAMN02437369	Shi06HN023	Shigella flexneri Shi06HN023
GCA_000565605.1	AZOL00000000	SAMN02437368	Shi06HN118	Shigella flexneri Shi06HN118
GCA_000565585.1	AZOK00000000	SAMN02437367	Shi06GS48	Shigella flexneri Shi06GS48
GCA_000565565.1	AZOJ00000000	SAMN02437366	Shi06GS07	Shigella flexneri Shi06GS07
GCA_000565545.1	AZOI00000000	SAMN02437365	Shi06AH116	Shigella flexneri Shi06AH116
GCA_000565525.1	AZOH00000000	SAMN02437364	Shi06GS43	Shigella flexneri Shi06GS43
GCA_000565505.1	AZOG00000000	SAMN02437363	Shi06AH66	Shigella flexneri Shi06AH66

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Shigella flexneri Genome sequencing and assembly

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