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Report for CCDS7581.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7581.1 Public Homo sapiens 10 CASP7 24 110 108 CCDS HistoryNCBI Gene:840Re-query CCDS DB by CCDS ID:7581.1Re-query CCDS DB by GeneID:840See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7581.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000345633.8 ENSP00000298701.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000345633.8Link to Ensembl Protein Viewer:ENSP00000298701.7Re-query CCDS DB by Nucleotide ID:ENST00000345633Re-query CCDS DB by Protein ID:ENSP00000298701
Original member Current member EBI ENST00000369315.5 ENSP00000358321.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369315.5Link to Ensembl Protein Viewer:ENSP00000358321.1Re-query CCDS DB by Nucleotide ID:ENST00000369315Re-query CCDS DB by Protein ID:ENSP00000358321
Original member Current member EBI ENST00000369318.8 ENSP00000358324.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369318.8Link to Ensembl Protein Viewer:ENSP00000358324.4Re-query CCDS DB by Nucleotide ID:ENST00000369318Re-query CCDS DB by Protein ID:ENSP00000358324
Original member Current member EBI ENST00000621345.4 ENSP00000480584.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000621345.4Link to Ensembl Protein Viewer:ENSP00000480584.1Re-query CCDS DB by Nucleotide ID:ENST00000621345Re-query CCDS DB by Protein ID:ENSP00000480584
Original member Current member NCBI NM_001227.5 NP_001218.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001227.5Link to Protein Sequence:NP_001218.1Re-query CCDS DB by Nucleotide ID:NM_001227Re-query CCDS DB by Protein ID:NP_001218Link to BLAST:NP_001218.1
Original member Current member NCBI NM_001267056.2 NP_001253985.1 Accepted alive Link to Nucleotide Sequence:NM_001267056.2Link to Protein Sequence:NP_001253985.1Re-query CCDS DB by Nucleotide ID:NM_001267056Re-query CCDS DB by Protein ID:NP_001253985Link to BLAST:NP_001253985.1
Original member Current member NCBI NM_033339.5 NP_203125.1 Accepted alive Link to Nucleotide Sequence:NM_033339.5Link to Protein Sequence:NP_203125.1Re-query CCDS DB by Nucleotide ID:NM_033339Re-query CCDS DB by Protein ID:NP_203125Link to BLAST:NP_203125.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001218.1 303 P55210-1 303 100% 0 0
NP_001253985.1 303 P55210-1 303 100% 0 0
NP_203125.1 303 P55210-1 303 100% 0 0

Chromosomal Locations for CCDS 7581.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 113697494 113697603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113721032 113721168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113721651 113721779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113725362 113725537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113726305 113726434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113729311 113729540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (912 nt):
ATGGCAGATGATCAGGGCTGTATTGAAGAGCAGGGGGTTGAGGATTCAGCAAATGAAGATTCAGTGGATG
CTAAGCCAGACCGGTCCTCGTTTGTACCGTCCCTCTTCAGTAAGAAGAAGAAAAATGTCACCATGCGATC
CATCAAGACCACCCGGGACCGAGTGCCTACATATCAGTACAACATGAATTTTGAAAAGCTGGGCAAATGC
ATCATAATAAACAACAAGAACTTTGATAAAGTGACAGGTATGGGCGTTCGAAACGGAACAGACAAAGATG
CCGAGGCGCTCTTCAAGTGCTTCCGAAGCCTGGGTTTTGACGTGATTGTCTATAATGACTGCTCTTGTGC
CAAGATGCAAGATCTGCTTAAAAAAGCTTCTGAAGAGGACCATACAAATGCCGCCTGCTTCGCCTGCATC
CTCTTAAGCCATGGAGAAGAAAATGTAATTTATGGGAAAGATGGTGTCACACCAATAAAGGATTTGACAG
CCCACTTTAGGGGGGATAGATGCAAAACCCTTTTAGAGAAACCCAAACTCTTCTTCATTCAGGCTTGCCG
AGGGACCGAGCTTGATGATGGCATCCAGGCCGACTCGGGGCCCATCAATGACACAGATGCTAATCCTCGA
TACAAGATCCCAGTGGAAGCTGACTTCCTCTTCGCCTATTCCACGGTTCCAGGCTATTACTCGTGGAGGA
GCCCAGGAAGAGGCTCCTGGTTTGTGCAAGCCCTCTGCTCCATCCTGGAGGAGCACGGAAAAGACCTGGA
AATCATGCAGATCCTCACCAGGGTGAATGACAGAGTTGCCAGGCACTTTGAGTCTCAGTCTGATGACCCA
CACTTCCATGAGAAGAAGCAGATCCCCTGTGTGGTCTCCATGCTCACCAAGGAACTCTACTTCAGTCAAT
AG

Translation (303 aa):
MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQYNMNFEKLGKC
IIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQDLLKKASEEDHTNAACFACI
LLSHGEENVIYGKDGVTPIKDLTAHFRGDRCKTLLEKPKLFFIQACRGTELDDGIQADSGPINDTDANPR
YKIPVEADFLFAYSTVPGYYSWRSPGRGSWFVQALCSILEEHGKDLEIMQILTRVNDRVARHFESQSDDP
HFHEKKQIPCVVSMLTKELYFSQ


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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