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Report for CCDS2632.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2632.1 Public Homo sapiens 3 KCNH8 24 110 108 CCDS HistoryNCBI Gene:131096Re-query CCDS DB by CCDS ID:2632.1Re-query CCDS DB by GeneID:131096See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2632.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328405.7 ENSP00000328813.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000328405.7Link to Ensembl Protein Viewer:ENSP00000328813.2Re-query CCDS DB by Nucleotide ID:ENST00000328405Re-query CCDS DB by Protein ID:ENSP00000328813
Original member Current member NCBI NM_144633.3 NP_653234.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144633.3Link to Protein Sequence:NP_653234.2Re-query CCDS DB by Nucleotide ID:NM_144633Re-query CCDS DB by Protein ID:NP_653234Link to BLAST:NP_653234.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653234.2 1107 Q96L42-1 1107 100% 0 0

Chromosomal Locations for CCDS 2632.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 19148720 19148795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19253654 19253887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19281198 19281329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19342587 19342714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19347725 19347965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19390481 19390638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19395104 19395311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19438164 19438361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19450106 19450305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19451155 19451404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19456768 19456982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19510363 19510401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19512970 19513325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19515322 19515428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19517998 19518074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19533395 19534099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3324 nt):
ATGCCGGTTATGAAAGGATTACTGGCGCCGCAAAACACCTTCCTGGACACCATCGCCACCCGTTTTGACG
GAACACATAGCAACTTCATCCTTGCCAATGCCCAGGTGGCTAAGGGTTTCCCCATAGTCTACTGTTCCGA
TGGCTTCTGCGAGCTTGCTGGATTTGCCCGAACTGAAGTCATGCAGAAGAGTTGTAGCTGCAAGTTCTTA
TTTGGGGTTGAAACCAATGAGCAACTGATGCTTCAAATAGAAAAGTCACTGGAGGAGAAAACAGAATTCA
AAGGAGAAATTATGTTCTACAAGAAAAACGGGTCTCCATTTTGGTGCCTACTGGATATTGTTCCCATAAA
GAATGAAAAAGGAGATGTAGTACTTTTTCTGGCCTCGTTCAAAGATATAACAGATACAAAAGTGAAGATT
ACTCCAGAAGATAAAAAAGAAGACAAAGTCAAAGGAAGATCAAGAGCAGGGACCCACTTTGACTCAGCCC
GGAGACGGAGTCGAGCAGTCCTTTATCACATCTCTGGGCACCTGCAAAGAAGAGAAAAGAACAAATTGAA
AATAAATAACAATGTTTTTGTAGATAAACCAGCATTTCCGGAGTATAAAGTTTCTGATGCAAAAAAGTCC
AAATTCATACTTCTGCATTTTAGCACTTTTAAAGCTGGCTGGGACTGGCTTATTTTGTTGGCAACGTTTT
ATGTTGCTGTGACTGTACCTTACAACGTTTGCTTTATTGGCAATGACGACCTGTCCACAACTCGGAGCAC
AACCGTCAGTGACATTGCAGTGGAGATTCTTTTTATTATAGATATTATTTTAAATTTCCGAACAACTTAT
GTCAGCAAGTCTGGCCAAGTTATCTTTGAAGCAAGATCAATTTGCATCCACTATGTCACAACCTGGTTCA
TCATTGATTTAATCGCTGCCCTGCCTTTTGATCTTCTGTATGCTTTCAACGTCACAGTGGTGTCTCTCGT
GCATCTTCTAAAGACAGTGCGCCTCTTGCGTCTTTTGCGTCTGCTGCAGAAGTTAGACCGCTATTCCCAA
CACAGTACTATCGTCCTGACTCTGCTCATGTCCATGTTTGCACTCCTTGCACACTGGATGGCGTGTATCT
GGTACGTCATTGGAAAAATGGAGAGGGAAGACAACAGCCTTCTGAAGTGGGAAGTTGGTTGGCTTCATGA
GTTGGGAAAGAGACTGGAATCTCCATACTATGGCAACAATACCTTGGGGGGCCCGTCGATCCGAAGTGCC
TATATTGCCGCTCTGTACTTCACGCTGAGCAGCCTCACCAGCGTGGGTTTTGGGAACGTCTCTGCTAATA
CAGATGCAGAAAAGATCTTCTCCATCTGCACCATGCTGATTGGTGCCTTGATGCACGCCTTGGTGTTTGG
AAACGTGACAGCAATCATACAGAGGATGTACTCCAGATGGTCCCTCTATCACACTAGAACTAAGGATCTG
AAAGATTTCATCCGTGTCCATCACTTGCCCCAACAACTCAAGCAGAGGATGCTCGAATATTTTCAAACAA
CCTGGTCAGTCAACAATGGAATAGATTCAAATGAGCTTTTGAAAGACTTTCCAGATGAACTGCGTTCTGA
CATCACTATGCACTTGAACAAGGAGATCTTACAGTTGTCCCTTTTTGAATGTGCCAGCCGGGGCTGCCTC
AGGTCTCTGTCTCTACACATCAAAACCTCTTTCTGTGCTCCGGGGGAGTATCTGCTGCGTCAAGGGGATG
CTTTGCAGGCCATCTACTTTGTATGCTCGGGCTCCATGGAAGTTCTTAAAGACAGCATGGTGCTGGCTAT
TCTTGGGAAAGGGGATTTAATTGGAGCAAATCTATCAATTAAGGACCAAGTGATCAAGACCAATGCAGAT
GTAAAGGCTTTAACCTACTGTGATCTCCAGTGTATCATCCTCAAAGGACTCTTTGAAGTGCTAGACCTTT
ACCCAGAATATGCTCACAAATTCGTGGAAGACATTCAGCATGACCTCACATACAACCTCCGAGAAGGTCA
TGAGAGTGATGTGATATCAAGACTATCAAACAAATCTATGGTCTCACAGTCAGAGCCCAAGGGAAATGGC
AACATCAACAAGCGACTCCCATCCATTGTGGAAGATGAGGAAGAGGAGGAGGAGGGGGAGGAAGAGGAGG
CAGTCTCCCTCTCTCCCATCTGCACAAGGGGATCTTCTTCGCGCAACAAGAAGGTTGGAAGCAATAAAGC
CTACCTGGGCTTAAGCTTAAAGCAACTGGCCTCGGGAACGGTGCCCTTTCACTCGCCTATCAGAGTCTCC
AGGTCAAATTCCCCCAAAACCAAGCAGGAAATTGACCCCCCCAACCATAATAAAAGGAAAGAGAAGAACT
TGAAATTGCAACTTTCAACTTTGAATAATGCTGGACCCCCAGACCTCAGTCCAAGGATTGTTGATGGAAT
TGAAGATGGAAACAGCAGTGAAGAAAGTCAGACTTTTGATTTTGGCTCTGAACGAATCAGATCAGAGCCC
AGAATTTCTCCTCCTCTTGGAGATCCAGAGATTGGAGCTGCTGTTCTCTTCATCAAAGCAGAGGAGACCA
AGCAGCAGATAAACAAACTCAACAGTGAGGTAACAACATTGACTCAGGAAGTTTCTCAGTTGGGTAAAGA
CATGAGAAATGTGATCCAGCTTCTGGAAAACGTTCTGTCACCTCAGCAGCCATCACGGTTTTGCTCTTTG
CACAGCACCTCTGTGTGTCCCTCCAGGGAGAGCTTACAGACCAGAACGAGCTGGAGTGCACACCAGCCTT
GCCTACACTTGCAAACAGGCGGGGCTGCTTATACCCAAGCACAACTTTGTAGCAGTAATATCACCTCAGA
CATTTGGAGTGTGGATCCCTCCTCTGTGGGGAGCAGCCCCCAACGAACTGGAGCTCATGAGCAAAATCCT
GCAGACAGTGAACTTTATCATTCTCCAAGCCTTGATTATTCACCTTCCCACTACCAGGTTGTCCAAGAAG
GTCATTTGCAATTTTTAAGGTGCATCTCTCCACATTCAGATTCTACGTTGACGCCTCTGCAGTCCATTTC
AGCAACTCTCTCATCTTCTGTCTGCTCCTCTTCGGAAACATCTTTGCACCTAGTTCTCCCAAGCAGATCA
GAGGAGGGCAGCTTCAGTCAGGGAACTGTGAGTTCCTTCAGTCTGGAAAACTTACCAGGATCTTGGAACC
AGGAAGGAATGGCATCAGCTTCTACAAAACCTTTGGAGAACCTTCCACTGGAAGTTGTCACAAGCACAGC
AGAAGTGAAAGATAACAAAGCCATAAATGTATGA

Translation (1107 aa):
MPVMKGLLAPQNTFLDTIATRFDGTHSNFILANAQVAKGFPIVYCSDGFCELAGFARTEVMQKSCSCKFL
FGVETNEQLMLQIEKSLEEKTEFKGEIMFYKKNGSPFWCLLDIVPIKNEKGDVVLFLASFKDITDTKVKI
TPEDKKEDKVKGRSRAGTHFDSARRRSRAVLYHISGHLQRREKNKLKINNNVFVDKPAFPEYKVSDAKKS
KFILLHFSTFKAGWDWLILLATFYVAVTVPYNVCFIGNDDLSTTRSTTVSDIAVEILFIIDIILNFRTTY
VSKSGQVIFEARSICIHYVTTWFIIDLIAALPFDLLYAFNVTVVSLVHLLKTVRLLRLLRLLQKLDRYSQ
HSTIVLTLLMSMFALLAHWMACIWYVIGKMEREDNSLLKWEVGWLHELGKRLESPYYGNNTLGGPSIRSA
YIAALYFTLSSLTSVGFGNVSANTDAEKIFSICTMLIGALMHALVFGNVTAIIQRMYSRWSLYHTRTKDL
KDFIRVHHLPQQLKQRMLEYFQTTWSVNNGIDSNELLKDFPDELRSDITMHLNKEILQLSLFECASRGCL
RSLSLHIKTSFCAPGEYLLRQGDALQAIYFVCSGSMEVLKDSMVLAILGKGDLIGANLSIKDQVIKTNAD
VKALTYCDLQCIILKGLFEVLDLYPEYAHKFVEDIQHDLTYNLREGHESDVISRLSNKSMVSQSEPKGNG
NINKRLPSIVEDEEEEEEGEEEEAVSLSPICTRGSSSRNKKVGSNKAYLGLSLKQLASGTVPFHSPIRVS
RSNSPKTKQEIDPPNHNKRKEKNLKLQLSTLNNAGPPDLSPRIVDGIEDGNSSEESQTFDFGSERIRSEP
RISPPLGDPEIGAAVLFIKAEETKQQINKLNSEVTTLTQEVSQLGKDMRNVIQLLENVLSPQQPSRFCSL
HSTSVCPSRESLQTRTSWSAHQPCLHLQTGGAAYTQAQLCSSNITSDIWSVDPSSVGSSPQRTGAHEQNP
ADSELYHSPSLDYSPSHYQVVQEGHLQFLRCISPHSDSTLTPLQSISATLSSSVCSSSETSLHLVLPSRS
EEGSFSQGTVSSFSLENLPGSWNQEGMASASTKPLENLPLEVVTSTAEVKDNKAINV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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