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Report for CCDS11933.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11933.1 Public Homo sapiens 18 IER3IP1 24 110 108 CCDS HistoryNCBI Gene:51124Re-query CCDS DB by CCDS ID:11933.1Re-query CCDS DB by GeneID:51124See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11933.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000256433.6 ENSP00000256433.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000256433.6Link to Ensembl Protein Viewer:ENSP00000256433.3Re-query CCDS DB by Nucleotide ID:ENST00000256433Re-query CCDS DB by Protein ID:ENSP00000256433
Original member Current member EBI ENST00000588705.1 ENSP00000465194.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000588705.1Link to Ensembl Protein Viewer:ENSP00000465194.1Re-query CCDS DB by Nucleotide ID:ENST00000588705Re-query CCDS DB by Protein ID:ENSP00000465194
Original member Current member NCBI NM_016097.5 NP_057181.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016097.5Link to Protein Sequence:NP_057181.1Re-query CCDS DB by Nucleotide ID:NM_016097Re-query CCDS DB by Protein ID:NP_057181Link to BLAST:NP_057181.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057181.1 82 Q9Y5U9 82 100% 0 0

Chromosomal Locations for CCDS 11933.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 47156177 47156232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 47157436 47157537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 47176187 47176277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (249 nt):
ATGGCCTTTACCCTGTACTCACTGCTGCAGGCAGCCCTGCTCTGCGTCAACGCCATCGCAGTGCTGCACG
AGGAGCGATTCCTCAAGAACATTGGCTGGGGAACAGACCAGGGAATTGGTGGATTTGGAGAAGAGCCGGG
AATTAAATCACAGCTAATGAACCTTATTCGATCTGTAAGAACCGTGATGAGAGTGCCATTGATAATAGTA
AACTCAATTGCAATTGTGTTACTTTTATTATTTGGATGA

Translation (82 aa):
MAFTLYSLLQAALLCVNAIAVLHEERFLKNIGWGTDQGIGGFGEEPGIKSQLMNLIRSVRTVMRVPLIIV
NSIAIVLLLLFG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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