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Report for CCDS92481.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92481.1 Public Homo sapiens 19 REEP6 24 110 108 CCDS HistoryNCBI Gene:92840Re-query CCDS DB by CCDS ID:92481.1Re-query CCDS DB by GeneID:92840See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92481.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395479.10 ENSP00000378861.5 MANE Plus Clinical Accepted alive Link to Ensembl Transcript Viewer:ENST00000395479.10Link to Ensembl Protein Viewer:ENSP00000378861.5Re-query CCDS DB by Nucleotide ID:ENST00000395479Re-query CCDS DB by Protein ID:ENSP00000378861
Original member Current member NCBI NM_001329556.3 NP_001316485.1 MANE Plus Clinical Accepted alive Link to Nucleotide Sequence:NM_001329556.3Link to Protein Sequence:NP_001316485.1Re-query CCDS DB by Nucleotide ID:NM_001329556Re-query CCDS DB by Protein ID:NP_001316485Link to BLAST:NP_001316485.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001316485.1 211 Q96HR9-1 211 100% 0 0

Chromosomal Locations for CCDS 92481.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 1491270 1491384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1495294 1495387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1495469 1495607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1496285 1496453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1496591 1496671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1497174 1497211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (636 nt):
ATGGACGGCCTGAGGCAGCGCGTGGAGCACTTCCTGGAGCAAAGGAACCTGGTCACCGAAGTGCTGGGGG
CGCTGGAGGCCAAGACCGGGGTGGAGAAGCGGTATCTGGCTGCAGGAGCCGTCACTCTGCTAAGCCTGTA
TCTGCTGTTCGGCTACGGAGCGTCTCTGCTGTGCAATCTCATCGGATTTGTGTACCCCGCATATGCCTCA
ATCAAAGCTATCGAGAGCCCAAGCAAGGACGACGACACTGTGTGGCTCACCTACTGGGTGGTGTACGCCC
TGTTTGGGCTGGCCGAGTTCTTCAGCGATCTACTCCTGTCCTGGTTCCCTTTCTACTACGTGGGCAAGTG
CGCCTTCCTGTTGTTCTGCATGGCTCCCAGGCCCTGGAACGGGGCTCTCATGCTGTATCAGCGCGTCGTG
CGTCCGCTGTTCCTAAGGCACCACGGGGCCGTAGACAGAATCATGAACGACCTCAGCGGGCGAGCCCTGG
ACGCGGCGGCCGGAATAACCAGGAACGTCTTGCAGGTCCTGGCCCGTAGCCGGGCAGGCATCACCCCGGT
GGCTGTGGCCGGGCCCTCCACTCCCCTGGAAGCTGACCTCAAGCCAAGCCAGACCCCGCAGCCGAAGGAC
AAGTGA

Translation (211 aa):
MDGLRQRVEHFLEQRNLVTEVLGALEAKTGVEKRYLAAGAVTLLSLYLLFGYGASLLCNLIGFVYPAYAS
IKAIESPSKDDDTVWLTYWVVYALFGLAEFFSDLLLSWFPFYYVGKCAFLLFCMAPRPWNGALMLYQRVV
RPLFLRHHGAVDRIMNDLSGRALDAAAGITRNVLQVLARSRAGITPVAVAGPSTPLEADLKPSQTPQPKD
K


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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