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Report for CCDS87532.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87532.1 Public Homo sapiens 7 UPK3BL2 24 110 108 CCDS HistoryNCBI Gene:107983993Re-query CCDS DB by CCDS ID:87532.1Re-query CCDS DB by GeneID:107983993See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87532.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000644544.2 ENSP00000494359.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000644544.2Link to Ensembl Protein Viewer:ENSP00000494359.1Re-query CCDS DB by Nucleotide ID:ENST00000644544Re-query CCDS DB by Protein ID:ENSP00000494359
Original member Current member NCBI NM_001363506.2 NP_001350435.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001363506.2Link to Protein Sequence:NP_001350435.1Re-query CCDS DB by Nucleotide ID:NM_001363506Re-query CCDS DB by Protein ID:NP_001350435Link to BLAST:NP_001350435.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001350435.1 263 E5RIL1 263 100% 0 0

Chromosomal Locations for CCDS 87532.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 102538417 102538525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102539606 102539726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102540015 102540091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102541093 102541303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102541501 102541662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102543525 102543636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (792 nt):
ATGGACAACAGCTGGAGGCTTGGCCCGGCCATAGGGCTCTCTGCGGGACAGTCCCAGCTGCTAGTGTCGC
TGTTGCTGCTACTGACCCGTGTCCAGCCTGGGACAGACGTGGCTGCCCCAGAGCACATCAGCTATGTGCC
CCAGCTCTCAAACGACACCTTGGCGGGGAGGCTCACCCTGTCCACCTTCACGCTGGAGCAGCCTCTAGGC
CAGTTCAGCAGCCACAACATCTCTGACTTGGATACCATCTGGCTGGTGGTGGCCCTCAGCAACGCCACCC
AGAGCTTCACGGCCCCACGGACAAACCAGGACATCCCTGCTCCTGCCAACTTCTCCCAGAGGGGCTACTA
TCTCACACTGAGGGCCAACCGGGTGCTGTACCAGACCAGAGGCCAGCTCCATGTCCTCCGCGTCGGCAAT
GATACCCACTGCCAACCAACAAAAATTGGCTGCAACCATCCCCTACCAGGACCCGGCCCCTACAGGGTGA
AGTTCCTGGTGATGAATGACGAAGGACCCGTGGCTGAAACAAAGTGGTCCAGCGACACTCGCCTGCAGCA
AGCCCAGGCACTTCGGGCTGTCCCCGGCCCCCAGAGCCCGGGCACCGTGGTCATCATCGCCATCCTGTCT
ATCCTCCTGGCCGTCCTCCTCACGGTCCTCCTGGCTGTGCTCATATACACCTGCTTCAACAGCTGCAGGA
GCACTTCCCTATCAGGCCCAGAGGAGGCAGGGAGTGTGAGAAGATACACCACGCACCTCGCGTTCAGCAC
TCCTGCCGAGGGGGCTTCCTGA

Translation (263 aa):
MDNSWRLGPAIGLSAGQSQLLVSLLLLLTRVQPGTDVAAPEHISYVPQLSNDTLAGRLTLSTFTLEQPLG
QFSSHNISDLDTIWLVVALSNATQSFTAPRTNQDIPAPANFSQRGYYLTLRANRVLYQTRGQLHVLRVGN
DTHCQPTKIGCNHPLPGPGPYRVKFLVMNDEGPVAETKWSSDTRLQQAQALRAVPGPQSPGTVVIIAILS
ILLAVLLTVLLAVLIYTCFNSCRSTSLSGPEEAGSVRRYTTHLAFSTPAEGAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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