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Report for CCDS86678.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86678.1 Public Homo sapiens 18 SERPINB8 24 110 108 CCDS HistoryNCBI Gene:5271Re-query CCDS DB by CCDS ID:86678.1Re-query CCDS DB by GeneID:5271See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86678.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000636430.1 ENSP00000489949.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000636430.1Link to Ensembl Protein Viewer:ENSP00000489949.1Re-query CCDS DB by Nucleotide ID:ENST00000636430Re-query CCDS DB by Protein ID:ENSP00000489949
Original member Current member NCBI NM_001348367.2 NP_001335296.1 Accepted alive Link to Nucleotide Sequence:NM_001348367.2Link to Protein Sequence:NP_001335296.1Re-query CCDS DB by Nucleotide ID:NM_001348367Re-query CCDS DB by Protein ID:NP_001335296Link to BLAST:NP_001335296.1

Chromosomal Locations for CCDS 86678.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 63978309 63978476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63979801 63979938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63981721 63981838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63983579 63983721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63985093 63985245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 64004819 64004878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (780 nt):
ATGGATGACCTCTGTGAAGCAAATGGCACTTTTGCCATCAGCTTATTTAAAATATTGGGGGAAGAGGACA
ACTCAAGAAACGTATTCTTCTCTCCCATGAGCATCTCCTCTGCCCTGGCCATGGTCTTCATGGGGGCAAA
GGGAAGCACTGCAGCCCAGATGTCCCAGGCACTTTGTTTATACAAAGACGGAGATATTCACCGAGGTTTC
CAGTCACTTCTCAGTGAAGTTAACAGAACTGGCACTCAGTACTTGCTTAGAACTGCCAACAGACTCTTTG
GAGAAAAGACGTGTGATTTCCTTCCAGACTTTAAAGAATACTGTCAGAAGTTCTATCAGGCAGAGCTGGA
GGAGTTGTCCTTTGCTGAAGACACTGAAGAGTGCAGGAAGCATATAAATGACTGGGTGGCAGAGAAGACT
GAAGGTAAGATTTCAGAGGTACTGGATGCTGGGACAGTCGATCCCCTGACAAAGCTGGTCCTTGTGAATG
CCATTTATTTCAAGGGAAAGTGGAATGAGCAATTTGACAGAAAGTACACAAGGGGAATGCTCTTTAAAAC
CAACGAGGAAAAAAAGACAGTGCAGATGATGTTTAAGGAAGCTAAGTTTAAAATGGGGTATGCGGATGAG
GTACACACCCAGGTCCTGGAGCTGCCCTATGTGGAAGAGGAGCTGAGCATGGTCATTCTGCTTCCCGATG
ACAACACGGACCTCGCCGTGGATACACTGAGAAGCACAAGCTTCTTCTGTGACATTCTTGCCAACATTAT
CAGCACCTGA

Translation (259 aa):
MDDLCEANGTFAISLFKILGEEDNSRNVFFSPMSISSALAMVFMGAKGSTAAQMSQALCLYKDGDIHRGF
QSLLSEVNRTGTQYLLRTANRLFGEKTCDFLPDFKEYCQKFYQAELEELSFAEDTEECRKHINDWVAEKT
EGKISEVLDAGTVDPLTKLVLVNAIYFKGKWNEQFDRKYTRGMLFKTNEEKKTVQMMFKEAKFKMGYADE
VHTQVLELPYVEEELSMVILLPDDNTDLAVDTLRSTSFFCDILANIIST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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