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Report for CCDS84074.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84074.1 Public Mus musculus 14 2610042L04Rik 23 108 98 CCDS HistoryNCBI Gene:554327Re-query CCDS DB by CCDS ID:84074.1Re-query CCDS DB by GeneID:554327See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84074.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112778.3 ENSMUSP00000108398.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112778.3Link to Ensembl Protein Viewer:ENSMUSP00000108398.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000112778Re-query CCDS DB by Protein ID:ENSMUSP00000108398
Original member Current member EBI ENSMUST00000165466.7 ENSMUSP00000132127.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000165466.7Link to Ensembl Protein Viewer:ENSMUSP00000132127.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000165466Re-query CCDS DB by Protein ID:ENSMUSP00000132127
Original member Current member NCBI NM_001309398.1 NP_001296327.1 Accepted alive Link to Nucleotide Sequence:NM_001309398.1Link to Protein Sequence:NP_001296327.1Re-query CCDS DB by Nucleotide ID:NM_001309398Re-query CCDS DB by Protein ID:NP_001296327Link to BLAST:NP_001296327.1

Chromosomal Locations for CCDS 84074.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 4348841 4348968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 4349922 4350053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 4350728 4350910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 4353453 4353462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (453 nt):
ATGACTAAGCAGAGATCAAAAATAAATGAACTAGAAGAACTGAAATTGTATATGAGGAAGATCAGCAATG
ACATGGAGGAAATGTGTGGAATCCTGAACCTTTACATATATGAGGATTTGAACTACAGGATGAACACTGA
ATTCAACATCATTAAATCACAACATGAGAAGACAATGTTGGATATGAATAAAATGATCCAGTCCATAATT
GGTTCCATGCAGTACTCCAAGGAACTGATAGAAGATAACTATTCCTACAGCATTAAGGAGGACCACCTCC
TCCGTGAGTGCACTCAACTCAACGAAAACGTAAGGATATTACTGAATGAGAACAGAAGGCTGCTGGTGGA
GCAGGCTGGCCACAAGTGTCCTGTGGGGAAGAAAAGAGGTTCTCTGAGGAGGCCAGCAAGAACATCTGTG
TCCCAAGTGCCAAGGAACAACAGTGTGAAATAG

Translation (150 aa):
MTKQRSKINELEELKLYMRKISNDMEEMCGILNLYIYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSII
GSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSV
SQVPRNNSVK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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