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Report for CCDS81755.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81755.1 Public Homo sapiens 12 GALNT9 24 110 108 CCDS HistoryNCBI Gene:50614Re-query CCDS DB by CCDS ID:81755.1Re-query CCDS DB by GeneID:50614See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81755.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328957.13 ENSP00000329846.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000328957.13Link to Ensembl Protein Viewer:ENSP00000329846.8Re-query CCDS DB by Nucleotide ID:ENST00000328957Re-query CCDS DB by Protein ID:ENSP00000329846
Original member Current member NCBI NM_001122636.2 NP_001116108.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001122636.2Link to Protein Sequence:NP_001116108.1Re-query CCDS DB by Nucleotide ID:NM_001122636Re-query CCDS DB by Protein ID:NP_001116108Link to BLAST:NP_001116108.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001116108.1 603 Q9HCQ5-1 603 99.8342% 0 1

Chromosomal Locations for CCDS 81755.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 132197107 132197253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132197792 132197959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132199174 132199269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132201124 132201261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132203505 132203690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132247910 132248027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132257689 132257886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132260948 132261122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132262459 132262625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132286250 132286430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132328966 132329203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1812 nt):
ATGGCGGTGGCCAGGAAGATCCGAACTTTGCTGACGGTGAACATCCTGGTGTTCGTGGGCATCGTCCTGT
TCTCCGTGTACTGCCGCCTGCAGGGCCGCTCCCAGGAGCTCGTGCGCATCGTGAGCGGCGACCGCCGGGT
GCGCAGCCGACACGCCAAGGTGGGCACGCTGGGGGACCGTGAGGCCATCCTGCAGCGCCTGGACCACCTG
GAGGAGGTGGTCTACAACCAGCTCAACGGCCTTGCCAAGCCCATCGGCCTGGTGGAGGGGCCAGGAGGCC
TGGGCCAGGGTGGCTTGGCGGCCACCCTGCGTGATGACGGCCAGGAGGCGGAAGGCAAGTATGAGGAGTA
CGGCTACAACGCTCAGCTCAGCGACCGCATCTCCCTCGATCGGAGCATCCCCGACTACCGGCCCAGAAAG
TGCAGACAGATGAGCTACGCCCAGGACCTGCCCCAGGTCTCCGTGGTCTTCATCTTCGTCAATGAGGCGC
TGTCGGTCATCCTGCGCTCCGTGCACAGCGTGGTCAACCACACGCCCTCCCAGCTCCTCAAGGAGGTCAT
CCTGGTGGACGACAACAGTGACAACGTGGAACTCAAGTTCAATCTGGACCAGTACGTCAACAAGCGGTAC
CCAGGCCTCGTGAAGATTGTCCGCAACAGCCGGCGGGAAGGACTGATCCGCGCGCGGCTGCAGGGCTGGA
AGGCGGCCACCGCCCCAGTCGTCGGCTTCTTTGATGCCCACGTCGAGTTCAACACGGGCTGGGCCGAGCC
CGCACTGTCGCGGATCCGAGAGGACCGGCGTCGCATCGTGCTGCCAGCCATCGACAACATCAAGTACAGC
ACGTTTGAGGTGCAGCAGTATGCGAACGCCGCCCATGGCTACAACTGGGGCCTCTGGTGCATGTACATCA
TCCCCCCGCAGGACTGGCTGGACCGCGGCGACGAGTCAGCACCCATCAGGACCCCAGCCATGATCGGCTG
CTCCTTCGTAGTGGACCGCGAGTACTTCGGAGACATTGGGCTGCTGGACCCCGGCATGGAGGTGTATGGC
GGCGAGAACGTAGAACTGGGCATGAGGGTGTGGCAGTGTGGCGGCAGCATGGAGGTGCTGCCCTGCTCCC
GCGTGGCCCACATCGAGCGCACCAGGAAGCCCTACAACAACGACATTGACTACTATGCCAAGCGCAACGC
CCTGCGCGCCGCCGAGGTGTGGATGGATGACTTCAAGTCCCACGTGTACATGGCCTGGAACATCCCCATG
TCGAACCCAGGGGTGGACTTCGGGGACGTGTCTGAGAGGCTGGCCCTGCGTCAGAGGCTGAAGTGTCGCA
GCTTCAAGTGGTACCTGGAGAACGTGTACCCGGAGATGAGGGTCTACAACAACACCCTCACGTACGGAGA
GGTGAGAAACAGCAAAGCCAGTGCCTACTGTCTGGACCAGGGAGCGGAGGACGGCGACCGGGCGATCCTC
TACCCCTGCCACGGGATGTCCTCCCAGCTGGTGCGGTACAGCGCTGATGGACTGCTGCAGCTGGGGCCTC
TGGGCTCCACAGCCTTCTTGCCTGACTCCAAGTGTCTGGTGGATGACGGCACGGGCCGCATGCCCACCCT
GAAGAAGTGTGAGGATGTGGCGCGGCCAACACAGCGGCTGTGGGACTTCACCCAGAGTGGCCCCATTGTG
AGCCGGGCCACGGGCCGCTGCCTGGAGGTGGAGATGTCCAAAGATGCCAACTTTGGGCTCCGGCTGGTGG
TACAGAGGTGCTCGGGGCAGAAGTGGATGATCAGAAACTGGATCAAACACGCACGGCACTGA

Translation (603 aa):
MAVARKIRTLLTVNILVFVGIVLFSVYCRLQGRSQELVRIVSGDRRVRSRHAKVGTLGDREAILQRLDHL
EEVVYNQLNGLAKPIGLVEGPGGLGQGGLAATLRDDGQEAEGKYEEYGYNAQLSDRISLDRSIPDYRPRK
CRQMSYAQDLPQVSVVFIFVNEALSVILRSVHSVVNHTPSQLLKEVILVDDNSDNVELKFNLDQYVNKRY
PGLVKIVRNSRREGLIRARLQGWKAATAPVVGFFDAHVEFNTGWAEPALSRIREDRRRIVLPAIDNIKYS
TFEVQQYANAAHGYNWGLWCMYIIPPQDWLDRGDESAPIRTPAMIGCSFVVDREYFGDIGLLDPGMEVYG
GENVELGMRVWQCGGSMEVLPCSRVAHIERTRKPYNNDIDYYAKRNALRAAEVWMDDFKSHVYMAWNIPM
SNPGVDFGDVSERLALRQRLKCRSFKWYLENVYPEMRVYNNTLTYGEVRNSKASAYCLDQGAEDGDRAIL
YPCHGMSSQLVRYSADGLLQLGPLGSTAFLPDSKCLVDDGTGRMPTLKKCEDVARPTQRLWDFTQSGPIV
SRATGRCLEVEMSKDANFGLRLVVQRCSGQKWMIRNWIKHARH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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