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Report for CCDS73306.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73306.1 Public Homo sapiens 11 C11orf98 24 110 108 CCDS HistoryNCBI Gene:102288414Re-query CCDS DB by CCDS ID:73306.1Re-query CCDS DB by GeneID:102288414See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73306.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000524958.6 ENSP00000432523.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000524958.6Link to Ensembl Protein Viewer:ENSP00000432523.2Re-query CCDS DB by Nucleotide ID:ENST00000524958Re-query CCDS DB by Protein ID:ENSP00000432523
Original member Current member NCBI NM_001286086.2 NP_001273015.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001286086.2Link to Protein Sequence:NP_001273015.1Re-query CCDS DB by Nucleotide ID:NM_001286086Re-query CCDS DB by Protein ID:NP_001273015Link to BLAST:NP_001273015.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273015.1 123 E9PRG8 123 100% 0 0

Chromosomal Locations for CCDS 73306.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 62663050 62663159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62663236 62663333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62664849 62664973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62665131 62665169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (372 nt):
ATGGGAGCTCCGGGGGGAAAGATCAACCGGCCCCGAACGGAGCTGAAGAAGAAGCTGTTCAAACGCCGGC
GGGTGTTGAATCGGGAGCGGCGTCTGAGGCACCGGGTGGTCGGGGCTGTGATAGACCAAGGGCTGATCAC
GCGGCACCACCTCAAGAAGCGGGCGTCCAGTGCACGTGCCAACATTACACTGTCAGGGAAGAAGCGCAGA
AAACTCCTCCAGCAGATCCGGCTTGCCCAGAAAGAGAAGACAGCCATGGAAGTGGAAGCCCCTTCAAAGC
CAGCCAGGACTAGTGAACCACAGCTCAAAAGGCAAAAGAAGACAAAAGCCCCCCAGGATGTAGAAATGAA
GGACCTTGAAGATGAGAGCTAA

Translation (123 aa):
MGAPGGKINRPRTELKKKLFKRRRVLNRERRLRHRVVGAVIDQGLITRHHLKKRASSARANITLSGKKRR
KLLQQIRLAQKEKTAMEVEAPSKPARTSEPQLKRQKKTKAPQDVEMKDLEDES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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