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Report for CCDS59155.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59155.1 Public Homo sapiens 9 TMEM250 24 110 108 CCDS HistoryNCBI Gene:90120Re-query CCDS DB by CCDS ID:59155.1Re-query CCDS DB by GeneID:90120See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59155.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000561457.2 ENSP00000452750.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000561457.2Link to Ensembl Protein Viewer:ENSP00000452750.2Re-query CCDS DB by Nucleotide ID:ENST00000561457Re-query CCDS DB by Protein ID:ENSP00000452750
Original member Current member EBI ENST00000418388.6 ENSP00000453019.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000418388.6Link to Ensembl Protein Viewer:ENSP00000453019.1Re-query CCDS DB by Nucleotide ID:ENST00000418388Re-query CCDS DB by Protein ID:ENSP00000453019
Original member Current member EBI ENST00000557985.2 ENSP00000457272.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000557985.2Link to Ensembl Protein Viewer:ENSP00000457272.1Re-query CCDS DB by Nucleotide ID:ENST00000557985Re-query CCDS DB by Protein ID:ENSP00000457272
Original member Current member NCBI NM_001256526.2 NP_001243455.1 Accepted alive Link to Nucleotide Sequence:NM_001256526.2Link to Protein Sequence:NP_001243455.1Re-query CCDS DB by Nucleotide ID:NM_001256526Re-query CCDS DB by Protein ID:NP_001243455Link to BLAST:NP_001243455.1
Original member Current member NCBI NM_152833.3 NP_690046.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152833.3Link to Protein Sequence:NP_690046.3Re-query CCDS DB by Nucleotide ID:NM_152833Re-query CCDS DB by Protein ID:NP_690046Link to BLAST:NP_690046.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243455.1 139 H0YL14 139 100% 0 0
NP_690046.3 139 H0YL14 139 100% 0 0

Chromosomal Locations for CCDS 59155.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 136116481 136116900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (420 nt):
ATGCCGGTCATGCCCATTCCGCGGCGGGTGCGCTCCTTCCACGGCCCGCACACCACCTGCCTGCATGCGG
CCTGCGGGCCCGTGCGCGCCTCCCACCTGGCCCGCACCAAGTACAACAACTTCGACGTGTACATCAAGAC
GCGCTGGCTGTACGGCTTCATCCGCTTCCTACTCTACTTTAGCTGCAGCCTGTTCACTGCGGCGCTCTGG
GGTGCGCTGGCCGCCCTCTTCTGCCTACAGTACCTGGGCGTTCGCGTCCTGCTGCGCTTCCAGCGCAAGC
TGTCGGTGCTGCTGCTGCTGCTGGGCCGCCGGCGCGTGGACTTCCGCCTGGTGAACGAGCTGCTCGTCTA
TGGCATCCACGTCACCATGCTGCTGGTCGGGGGCCTGGGCTGGTGCTTCATGGTCTTCGTGGACATGTGA

Translation (139 aa):
MPVMPIPRRVRSFHGPHTTCLHAACGPVRASHLARTKYNNFDVYIKTRWLYGFIRFLLYFSCSLFTAALW
GALAALFCLQYLGVRVLLRFQRKLSVLLLLLGRRRVDFRLVNELLVYGIHVTMLLVGGLGWCFMVFVDM


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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