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Report for CCDS32654.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32654.1 Public Homo sapiens 17 KRT9 24 110 108 CCDS HistoryNCBI Gene:3857Re-query CCDS DB by CCDS ID:32654.1Re-query CCDS DB by GeneID:3857See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32654.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000246662.9 ENSP00000246662.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000246662.9Link to Ensembl Protein Viewer:ENSP00000246662.4Re-query CCDS DB by Nucleotide ID:ENST00000246662Re-query CCDS DB by Protein ID:ENSP00000246662
Original member Current member NCBI NM_000226.4 NP_000217.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000226.4Link to Protein Sequence:NP_000217.2Re-query CCDS DB by Nucleotide ID:NM_000226Re-query CCDS DB by Protein ID:NP_000217Link to BLAST:NP_000217.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000217.2 623 P35527 623 100% 0 0

Chromosomal Locations for CCDS 32654.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 41567273 41567750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41568162 41568385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41568508 41568633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41569426 41569587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41569859 41570015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41570138 41570220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41571351 41571992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1872 nt):
ATGAGCTGCAGACAGTTCTCCTCGTCCTACTTGAGCCGCAGCGGCGGGGGTGGCGGGGGCGGCCTGGGCA
GCGGGGGCAGCATAAGGTCTTCCTACAGCCGCTTCAGCTCCTCAGGGGGCGGTGGAGGAGGGGGCCGATT
CAGCTCTTCTAGTGGCTATGGTGGGGGAAGCTCTCGTGTCTGTGGGAGGGGAGGCGGTGGCAGTTTTGGC
TACAGCTACGGCGGAGGATCTGGGGGTGGTTTTAGTGCCAGTAGTTTAGGCGGTGGCTTTGGGGGTGGTT
CCAGAGGTTTTGGTGGTGCTTCTGGAGGAGGCTATAGTAGTTCTGGGGGTTTTGGAGGTGGCTTTGGTGG
TGGTTCTGGAGGTGGCTTTGGTGGTGGCTATGGGAGTGGGTTTGGGGGGTTTGGGGGCTTTGGAGGTGGT
GCTGGAGGAGGTGATGGTGGTATTCTGACTGCTAATGAGAAGAGCACCATGCAGGAACTCAATTCTCGGC
TGGCCTCTTACTTGGATAAGGTGCAGGCTCTAGAGGAGGCCAACAACGACCTGGAGAATAAGATCCAGGA
TTGGTACGACAAGAAGGGACCTGCTGCTATCCAGAAGAACTACTCCCCTTATTATAACACTATTGATGAT
CTCAAGGACCAGATTGTGGACCTGACAGTGGGCAACAACAAAACTCTCCTGGACATTGACAACACTCGCA
TGACACTGGATGACTTCAGGATAAAGTTTGAGATGGAGCAAAACCTGCGGCAAGGAGTGGATGCTGACAT
CAATGGCCTGCGGCAGGTGCTGGACAATCTGACCATGGAGAAGTCTGACCTGGAGATGCAGTATGAGACT
CTGCAGGAGGAGCTGATGGCCCTCAAGAAGAATCATAAGGAGGAGATGAGTCAGCTGACTGGGCAGAACA
GTGGAGATGTCAATGTGGAGATAAACGTTGCTCCTGGCAAAGATCTCACCAAGACCCTCAATGACATGCG
TCAGGAGTATGAGCAGCTCATTGCTAAGAACAGAAAGGACATCGAGAATCAATATGAGACTCAGATAACC
CAGATCGAGCATGAGGTATCCAGTAGTGGTCAGGAGGTGCAGTCCAGTGCCAAGGAGGTGACCCAGCTCC
GGCACGGTGTCCAGGAGTTGGAGATTGAGCTGCAGTCTCAGCTCAGCAAGAAAGCAGCTCTGGAGAAGAG
CTTGGAAGACACGAAGAACCGCTACTGTGGCCAGCTGCAGATGATCCAGGAGCAGATCAGTAACTTGGAG
GCCCAGATCACTGACGTCCGGCAAGAGATCGAGTGCCAGAATCAGGAATACAGCCTTCTGCTCAGCATTA
AGATGCGGCTGGAGAAGGAAATCGAGACCTACCACAACCTCCTTGAGGGAGGCCAGGAAGACTTTGAATC
CTCCGGAGCTGGAAAAATTGGCCTTGGAGGTCGAGGAGGAAGTGGAGGCAGTTATGGAAGAGGATCCAGG
GGAGGAAGTGGAGGCAGCTATGGTGGAGGAGGAAGTGGAGGTGGCTATGGTGGAGGAAGTGGGTCCAGGG
GAGGAAGTGGAGGCAGCTACGGTGGAGGAAGTGGTTCTGGAGGAGGTAGTGGAGGTGGCTATGGTGGAGG
AAGTGGAGGTGGCCATAGCGGAGGAAGTGGAGGTGGTCATAGTGGAGGAAGTGGGGGCAACTATGGAGGA
GGAAGTGGCTCTGGAGGAGGAAGTGGGGGTGGCTATGGTGGAGGAAGTGGGTCCAGGGGAGGAAGTGGAG
GCAGCCATGGTGGAGGAAGTGGTTTTGGAGGTGAAAGTGGAGGCAGCTACGGAGGCGGTGAAGAAGCGAG
TGGAAGTGGTGGCGGCTACGGAGGAGGAAGCGGAAAATCATCCCATTCCTAG

Translation (623 aa):
MSCRQFSSSYLSRSGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFG
YSYGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFGGFGGG
AGGGDGGILTANEKSTMQELNSRLASYLDKVQALEEANNDLENKIQDWYDKKGPAAIQKNYSPYYNTIDD
LKDQIVDLTVGNNKTLLDIDNTRMTLDDFRIKFEMEQNLRQGVDADINGLRQVLDNLTMEKSDLEMQYET
LQEELMALKKNHKEEMSQLTGQNSGDVNVEINVAPGKDLTKTLNDMRQEYEQLIAKNRKDIENQYETQIT
QIEHEVSSSGQEVQSSAKEVTQLRHGVQELEIELQSQLSKKAALEKSLEDTKNRYCGQLQMIQEQISNLE
AQITDVRQEIECQNQEYSLLLSIKMRLEKEIETYHNLLEGGQEDFESSGAGKIGLGGRGGSGGSYGRGSR
GGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGG
GSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGKSSHS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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