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Report for CCDS20731.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20731.1 Public Mus musculus 7 Leng8 23 108 98 CCDS HistoryNCBI Gene:232798Re-query CCDS DB by CCDS ID:20731.1Re-query CCDS DB by GeneID:232798See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20731.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037472.12 ENSMUSP00000046465.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037472.12Link to Ensembl Protein Viewer:ENSMUSP00000046465.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000037472Re-query CCDS DB by Protein ID:ENSMUSP00000046465
Original member NCBI NM_172736.3 NP_766324.1 Updated not alive Link to Nucleotide Sequence:NM_172736.3Link to Protein Sequence:NP_766324.1Re-query CCDS DB by Nucleotide ID:NM_172736Re-query CCDS DB by Protein ID:NP_766324
Current member NCBI NM_172736.4 NP_766324.1 Accepted alive Link to Nucleotide Sequence:NM_172736.4Link to Protein Sequence:NP_766324.1Re-query CCDS DB by Nucleotide ID:NM_172736Re-query CCDS DB by Protein ID:NP_766324Link to BLAST:NP_766324.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766324.1 785 Q8CBY3-1 785 100% 0 0

Chromosomal Locations for CCDS 20731.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 4138751 4138788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4139419 4139590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4139936 4140043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4141023 4141133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4142032 4142284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4142497 4142638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4142834 4143037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4143419 4143697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4143788 4143928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4144053 4144338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4144712 4144813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4144895 4144963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4145055 4145184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4145266 4145588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2358 nt):
ATGGCGGCCAACGTGGGTGATCAGCGTGCTGCAGACTGGTCTTCTCAGTACAGCATGGTGACTGGGAACA
GCAGAGAAAATGGCATGGAGACTCCTATGCACGAGAACCCAGAGTGGGAGAAGGCCCGCCAGGCCCTGGC
CAGCATCAGCAAAGCAGGGGCTACCAGCAGTTCCAAAGCCAGCAGCAGTGGTCCTGTGGCCAGTGCACAA
TACGTCTCTCAGGCAGAAGCCTCTGCTTTGCAGCAGCAGCAGCAACAATACTACCAGTGGTACCAGCAGT
ACAACTATGCCTATCCGTATAGCTACTACTACCCCATGAGCATGTACCAGAGCTATGGCTCCCCCTCCCA
GTATGGGATGGCCAGCTCCTACGGCTCAGCTACAGCCCAGCAGCCATCGGCTCCCCAGCACCAAGGGACT
CTGAACCAGCCTCCAGTCCCTGGCATGGATGAGAGTATGGCCTACCAGGCTTCCCCTCAGCAGCTACCTG
CAGCTCAGCCCCCTCAGCCCTCAAACTCACAACATGGGACACATAGTCTAAGCAACGGCCCTCAGCCTGG
GACAGCCCCAAGCACTCAGCACAGTCAGGCCGGGGCTCCTACAGGGCAGGCATATGGGCCACACAGCTAC
AGCGAGCCTGCCAAACCTAAGAAGGGTCAGCAGTTATGGACCCGCATGAAACCAGCCCCTGGGACTGGGG
GTCTAAAATTTAACATCCAGAAGCGGCCCTTTGCTGTCACCAGCCAGAGCTTCAGCTCCAATTCAGAGGG
CCAACACAGCAGCTTTGGGCCCCAGCCCAACTCGGAGAACACTCAGAACCGCAGTGGACCTTCTGGCCGG
GGAAACCTGTCTGGGAAGCCAGATGATTGGCCTCAGGATATGAAGGAATATGTGGAACGGTGTTTCACCG
CCTGCGAGTCAGAAGAGGACAAGGACCGGACAGAGAAACTGCTCAAGGAGGTGCTACAGGCCCGGCTCCA
GGATGGCTCTGCCTACACCATCGACTGGAGCCGAGAGCCTCTGCCTGGGCTGACCAGGGAGCCTGTGGCT
GAGAGCCCCAAGAAGAAGCGGTGGGAGGCCCCTAGCAGCCTTCACCCTTCCAGGGGGGCAGGCTCGGTGA
CCAGGGGCGGGGGTGCCCAATCCCAGCGAGGGACACCTGGGGCTGGGGGTGCTGGCCGAGCTCGGGGTAG
CAGCTTCACCAAGTTCGGCAACCGCAACGTCTTCATGAAGGATAACAGCTCTTCCTCCAGCACGGATTCA
CGCTCCCGCTCCTCATCCAGGTCTCCCACGAGACACTTTCGGAGAAGTGACTCCCATTCAGACTCTGACA
GCTCCTACTCAGGGAATGAGTGCCACCCTGTAGGCCGCAGGAACCCACCCCCCAAGGGTCGGGGTGGTCG
AGGGGCCCACATGGATCGAGGTCGGGGCAGGGCGCAGCGTGGAAAGAGACATGACCTAGCTCCCACCAAA
CGTAGCCGCAAGAAGATGGCAGCACTGGAGTGCGAGGACCCAGAGCGTGAGCTTAAGAAGCAAAAGAGGG
CAGCCCGCTTCCAACATGGGCACTCACGTCGCCTGCGCCTTGAACCTTTGGTGCTACAGATGAGTAACCT
GGAGAGCAGTGGAGCTGACCCTGACTGGCAGGAGCTGCAGATTGTGGGCACCTGTCCTGACATTACAAAG
CACTATCTGCGGCTCACCTGCGCCCCAGACCCGTCAACTGTGCGACCTGTGGCTGTTTTGAAGAAGTCTC
TGTGCATGGTCAAGTCCCACTGGAAGGAGAAGCAGGACTATGCCTTTGCCTGTGAGCAGATGAAGTCCAT
TCGGCAGGACCTGACAGTGCAAGGCATCCGGACGGAGTTCACTGTGGAGGTGTATGAGACCCATGCCCGC
ATTGCCTTGGAGAAGGGTGACCATGAAGAATTCAACCAGTGCCAAACACAGCTTAAGTCACTGTACGCGG
AAAACTTAGCAGGCAATGTGGGTGAATTTACTGCATACCGAATCCTCTACTACATCTTCACCAAGAACTC
TGGAGACATCACTACGGAACTGGCATACCTCACAAGGGAGATGAAGGCAGACCCCTGCGTGGCCCACGCG
TTGGCACTGAGGGCAGCCTGGGCCCTGGGCAACTACCACCGCTTCTTCAGGCTCTATTGCCATGCACCTT
GCATGTCTGGCTACCTTGTGGACAAGTTTGCAGACCGGGAGCGCAAGGCCGCCCTCAAGGCCATGATCAA
AACGTATGTGGCACTGCACTCTGCTGCCTTCTGTGCCGTGGCTCTGCCACGTCCCCTCCGCATCCTGGTC
AGCCTTCAGCTCCTCTGCTGGAGTCCCCTCCCAGTCCCCTGTTCATAG

Translation (785 aa):
MAANVGDQRAADWSSQYSMVTGNSRENGMETPMHENPEWEKARQALASISKAGATSSSKASSSGPVASAQ
YVSQAEASALQQQQQQYYQWYQQYNYAYPYSYYYPMSMYQSYGSPSQYGMASSYGSATAQQPSAPQHQGT
LNQPPVPGMDESMAYQASPQQLPAAQPPQPSNSQHGTHSLSNGPQPGTAPSTQHSQAGAPTGQAYGPHSY
SEPAKPKKGQQLWTRMKPAPGTGGLKFNIQKRPFAVTSQSFSSNSEGQHSSFGPQPNSENTQNRSGPSGR
GNLSGKPDDWPQDMKEYVERCFTACESEEDKDRTEKLLKEVLQARLQDGSAYTIDWSREPLPGLTREPVA
ESPKKKRWEAPSSLHPSRGAGSVTRGGGAQSQRGTPGAGGAGRARGSSFTKFGNRNVFMKDNSSSSSTDS
RSRSSSRSPTRHFRRSDSHSDSDSSYSGNECHPVGRRNPPPKGRGGRGAHMDRGRGRAQRGKRHDLAPTK
RSRKKMAALECEDPERELKKQKRAARFQHGHSRRLRLEPLVLQMSNLESSGADPDWQELQIVGTCPDITK
HYLRLTCAPDPSTVRPVAVLKKSLCMVKSHWKEKQDYAFACEQMKSIRQDLTVQGIRTEFTVEVYETHAR
IALEKGDHEEFNQCQTQLKSLYAENLAGNVGEFTAYRILYYIFTKNSGDITTELAYLTREMKADPCVAHA
LALRAAWALGNYHRFFRLYCHAPCMSGYLVDKFADRERKAALKAMIKTYVALHSAAFCAVALPRPLRILV
SLQLLCWSPLPVPCS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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