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Report for CCDS13740.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13740.1 Public Homo sapiens 22 TMEM121B 24 110 108 CCDS HistoryNCBI Gene:27439Re-query CCDS DB by CCDS ID:13740.1Re-query CCDS DB by GeneID:27439See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13740.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331437.4 ENSP00000329318.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000331437.4Link to Ensembl Protein Viewer:ENSP00000329318.3Re-query CCDS DB by Nucleotide ID:ENST00000331437Re-query CCDS DB by Protein ID:ENSP00000329318
Original member Current member NCBI NM_031890.4 NP_114096.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031890.4Link to Protein Sequence:NP_114096.1Re-query CCDS DB by Nucleotide ID:NM_031890Re-query CCDS DB by Protein ID:NP_114096Link to BLAST:NP_114096.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_114096.1 578 Q9BXQ6-1 578 100% 0 0

Chromosomal Locations for CCDS 13740.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 17119391 17121127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1737 nt):
ATGCGCCCGGCGCTCGGCCACCCTCGCTCGGTCTCCTCCGCGTCCGGTTCCTTCCCGCCGCCCCCGGCAG
CCGCCCGGCTGCAGCCCCTCTTCCTCCGCGGGGGCTCCTTCCGCGGCCGGAGAGGCTCCGGCGACAGCAG
CACCAGCACCAGCACCAGCCGCGGGGGAGGCGGCGGCAGACGCGGCGGGGGCGGCGGCTCCCCGAGCAGC
AGCACGGGCGCCGAGCGCGAGGACGACGACGAGAGCCTCAGCGTCAGCAAGCCGCTGGTGCCCAACGCCG
CGCTCCTGGGGCCGCCGGCTCAGGTGGGCGCCCCCGCCGGCCCCGCGCCTGTCGCCTTCTCCTCCTCAGC
GGCCACCTCCTCCTCCACCTCCACGCCCACCTCCTCCTGCAGCATGACAGCCGCGGACTTCGGCGGGGGC
GCCGCGGCCGGGGCCGTCGGGGGCCCCGGGAGCCGCTCGGCGGGGGGCGCGGGCGGCACCGGGACCGGCA
GCGGCGCCTCCTGCTGCCCGTGTTGCTGCTGCTGCGGCTGCCCAGACCGCCCCGGCCGCAGAGGTCGGCG
CCGCGGCTGCGCCCCCAGTCCCAGGTGCCGCTGGGGCTACCAGGCGCTGTCCGTGGTGCTGCTGCTGGCG
CAGGGCGGCCTGCTGGACCTGTACCTCATCGCCGTCACCGACCTGTACTGGTGCTCCTGGATCGCCACTG
ACCTGGTGGTGGTGGTGGGCTGGGCCATCTTCTTCGCCAAGAACAGCCGGGGCCGTCGGGGCGGCGCAGC
CAGCGGCGCGCACAACCACCACCTGCACCACCACCACGCCGCGCCGCCCCTGCATCTGCCCGCCCCCTCG
GCCGCTACCGCTGGGGCCAAGGCACGCGGAGCCCGCGGGGGCGCCGGCGGCGCGGGGGGCGGCCTGGGGG
CGGCCGCGGCAGCGGGCGAGTTCGCCTTCGCCTACCTGGCCTGGCTTATCTACTCCATCGCCTTCACTCC
CAAGGTGGTGCTGATCCTGGGCACGTCCATCCTAGACCTCATCGAGCTACGCGCGCCCTTCGGCACCACG
GGCTTCCGTCTCACCATGGCGCTGTCGGTGCCCCTGCTCTACAGCTTGGTGCGGGCCATCAGCGAGGCGG
GCGCGCCCCCGGGATCGGCAGGACCCCTGCTGCTGCAGCCCCAGCGGCACCGCGCGGCCGGATGCTTCCT
GGGCACGTGCTTGGACCTGCTCGACAGCTTCACGCTGGTGGAGCTGATGCTGGAGGGCCGCGTGCCGCTG
CCCGCGCACCTGCGCTACCTGCTTATCGCCGTCTACTTCCTCACCCTCGCCTCGCCGGTGCTCTGGCTCT
ACGAGCTCAACGCCGCGGCCGCAGCGGCTGCATCCTGGGGCCAGGCCTCCGGGCCTGGCAGCTGCAGCCG
CCTTCTGCGCCTGCTGGGCGGCTGCCTGGTGGACGTGCCCTTGCTGGCGCTGCGCTGCCTCCTGGTGGTC
AGCTACCAGCAGCCCCTCTCCATCTTCATGCTCAAGAACCTCTTCTTCCTCGGCTGCCGGGGCCTGGAGG
CCCTGGAGGGCTGCTGGGACCGGGGCAATCGGGCCTCCCCGAGTCGGGCCAGAGGGGGCTACGGTGCTCC
GCCCTCCGCCCCTCCACCACCTCCGCCACCACCTCAGGGAGGCTCCCAGCTGGGCCACTGCATCTCGGAG
AACGAGGGGGGTGCTCATGGCTATGTCAACACCCTGGCTGTGGCCTCTCAGAATTGA

Translation (578 aa):
MRPALGHPRSVSSASGSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPSS
STGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGG
AAAGAVGGPGSRSAGGAGGTGTGSGASCCPCCCCCGCPDRPGRRGRRRGCAPSPRCRWGYQALSVVLLLA
QGGLLDLYLIAVTDLYWCSWIATDLVVVVGWAIFFAKNSRGRRGGAASGAHNHHLHHHHAAPPLHLPAPS
AATAGAKARGARGGAGGAGGGLGAAAAAGEFAFAYLAWLIYSIAFTPKVVLILGTSILDLIELRAPFGTT
GFRLTMALSVPLLYSLVRAISEAGAPPGSAGPLLLQPQRHRAAGCFLGTCLDLLDSFTLVELMLEGRVPL
PAHLRYLLIAVYFLTLASPVLWLYELNAAAAAAASWGQASGPGSCSRLLRLLGGCLVDVPLLALRCLLVV
SYQQPLSIFMLKNLFFLGCRGLEALEGCWDRGNRASPSRARGGYGAPPSAPPPPPPPPQGGSQLGHCISE
NEGGAHGYVNTLAVASQN


Links Key
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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