NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS9691.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9691.2 Public Homo sapiens 14 DNAAF2 24 110 108 CCDS HistoryNCBI Gene:55172Re-query CCDS DB by CCDS ID:9691.2Re-query CCDS DB by GeneID:55172See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 9691.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000298292.13 ENSP00000298292.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000298292.13Link to Ensembl Protein Viewer:ENSP00000298292.8Re-query CCDS DB by Nucleotide ID:ENST00000298292Re-query CCDS DB by Protein ID:ENSP00000298292
Original member Current member NCBI NM_018139.3 NP_060609.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018139.3Link to Protein Sequence:NP_060609.2Re-query CCDS DB by Nucleotide ID:NM_018139Re-query CCDS DB by Protein ID:NP_060609Link to BLAST:NP_060609.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060609.2 837 Q9NVR5-1 837 100% 0 0

Chromosomal Locations for CCDS 9691.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 49625542 49626048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 49628012 49628155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 49633287 49635149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2514 nt):
ATGGCCAAAGCGGCGGCCTCCTCGTCGCTGGAGGACTTGGACCTGAGCGGAGAGGAGGTCCAGCGGCTCA
CCTCCGCCTTCCAGGACCCGGAGTTCCGGCGAATGTTCTCCCAGTACGCCGAGGAGCTCACCGACCCGGA
GAACCGGCGGCGCTACGAGGCGGAGATCACCGCGCTAGAGCGTGAGCGCGGGGTGGAAGTGCGGTTCGTG
CACCCGGAGCCCGGCCATGTGCTGCGCACCAGCCTGGACGGGGCGCGGCGCTGCTTTGTGAATGTCTGCA
GCAACGCGTTGGTGGGCGCGCCCAGCAGCCGGCCCGGCTCCGGTGGCGACCGGGGCGCAGCTCCTGGCAG
CCACTGGTCCCTGCCCTACAGCCTGGCGCCCGGCCGCGAGTACGCGGGGCGCAGCAGCAGCCGCTACATG
GTCTACGACGTGGTCTTCCATCCAGACGCGCTTGCGCTGGCCCGGCGGCACGAGGGCTTCCGCCAGATGC
TGGACGCCACGGCCCTGGAGGCCGTCGAGAAGCAGTTCGGCGTGAAGCTGGACCGCAGGAATGCCAAGAC
CCTGAAGGCCAAGTATAAGGGGACCCCAGAGGCTGCGGTGCTGCGCACGCCCCTGCCCGGGGTCATCCCC
GCAAGGCCTGACGGGGAGCCGAAGGGTCCTCTCCCGGACTTCCCCTACCCTTACCAGTACCCGGCAGCCC
CCGGGCCCCGGGCGCCCTCCCCTCCGGAAGCGGCCTTGCAGCCCGCCCCCACCGAGCCTCGCTACAGCGT
GGTGCAGCGCCACCACGTGGACCTCCAGGATTACCGCTGCTCCAGGGACTCAGCCCCGAGCCCCGTGCCC
CATGAGCTGGTGATCACCATCGAACTGCCGCTGTTGCGCTCGGCCGAGCAGGCGGCGCTGGAGGTAACGA
GAAAGCTGCTGTGCCTCGACTCGAGGAAACCTGACTACCGGCTGCGGCTCTCGCTCCCGTACCCAGTGGA
CGATGGCCGCGGCAAGGCACAATTCAACAAGGCCCGGCGGCAGCTGGTGGTTACGCTGCCAGTGGTGCTG
CCGGCCGCGCGCCGGGAGCCCGCTGTCGCCGTCGCCGCCGCCGCGCCGGAAGAGTCCGCGGACCGGTCCG
GAACTGACGGCCAGGCCTGCGCTTCCGCTCGCGAGGGGGAGGCGGGACCCGCGAGGAGTCGCGCGGAGGA
CGGAGGCCACGATACCTGCGTGGCTGGGGCTGCGGGCTCCGGGGTCACCACCCTGGGCGACCCGGAGGTG
GCGCCTCCGCCGGCCGCAGCTGGAGAGGAGCGTGTCCCCAAGCCGGGGGAGCAGGACTTGAGCAGGCACG
CGGGGTCACCGCCGGGCAGCGTGGAGGAGCCATCTCCTGGAGGAGAAAACTCACCTGGTGGCGGAGGCTC
CCCTTGTTTGTCCTCCCGGAGCCTGGCGTGGGGTTCTTCTGCGGGAAGAGAGAGTGCGCGCGGAGATAGC
AGTGTGGAAACACGCGAGGAGTCGGAGGGCACGGGCGGCCAGCGCTCAGCCTGCGCCATGGGTGGTCCCG
GGACCAAGAGCGGGGAGCCTTTGTGTCCTCCGTTACTGTGTAATCAGGACAAAGAAACCTTGACTCTGCT
CATTCAGGTGCCTCGGATCCAGCCGCAAAGTCTTCAAGGAGATTTGAATCCCCTCTGGTACAAATTACGC
TTCTCCGCACAAGACTTAGTTTATTCCTTCTTTTTGCAATTTGCTCCAGAGAATAAATTGAGTACCACAG
AACCTGTGATTAGCATTTCTTCAAACAATGCAGTGATAGAACTGGCAAAATCTCCAGAGAGCCATGGACA
TTGGAGAGAGTGGTATTATGGTGTAAACAACGATTCTTTGGAGGAAAGGTTATTTGTCAATGAAGAAAAT
GTTAATGAGTTTCTTGAAGAGGTCCTGAGCTCTCCATTCAAACAGTCTATGTCCTTGACCCCACCATTAA
TTGAAGTTCTTCAAGTTACTGATAATAAGATTCAAATTAATGCAAAGTTGCAAGAATGTAGTAACTCTGA
TCAGCTACAAGGAAAGGAGGAAAGAGTAAATGAAGAAAGTCATCTAACTGAAAAGGAATATATAGAACAT
TGTAACACCCCTACAACTGATTCTGATTCATCTATAGCAGTTAAAGCACTACAAATAGATAGCTTTGGTT
TAGTTACATGCTTTCAACAAGAGTCTCTTGATGTTTCTCAAATGATACTTGGAAAATCTCAGCAACCTGA
GTCAAAAATGCAATCTGAATTTATAAAAGAAAAAAGTGCTACTTGTTCAAATGAGGAAAAAGATAACTTA
AACGAGTCAGTAATAACTGAAGAGAAAGAAACAGATGGAGATCACCTATCTTCATTACTGAACAAAACTA
CGGTTCACAATATACCTGGATTCGACAGCATAAAAGAAACCAATATGCAGGATGGTAGTGTGCAGGTCAT
TAAAGATCATGTGACCAATTGTGCATTCAGTTTTCAGAATTCTTTGCTATATGATTTGGATTAA

Translation (837 aa):
MAKAAASSSLEDLDLSGEEVQRLTSAFQDPEFRRMFSQYAEELTDPENRRRYEAEITALERERGVEVRFV
HPEPGHVLRTSLDGARRCFVNVCSNALVGAPSSRPGSGGDRGAAPGSHWSLPYSLAPGREYAGRSSSRYM
VYDVVFHPDALALARRHEGFRQMLDATALEAVEKQFGVKLDRRNAKTLKAKYKGTPEAAVLRTPLPGVIP
ARPDGEPKGPLPDFPYPYQYPAAPGPRAPSPPEAALQPAPTEPRYSVVQRHHVDLQDYRCSRDSAPSPVP
HELVITIELPLLRSAEQAALEVTRKLLCLDSRKPDYRLRLSLPYPVDDGRGKAQFNKARRQLVVTLPVVL
PAARREPAVAVAAAAPEESADRSGTDGQACASAREGEAGPARSRAEDGGHDTCVAGAAGSGVTTLGDPEV
APPPAAAGEERVPKPGEQDLSRHAGSPPGSVEEPSPGGENSPGGGGSPCLSSRSLAWGSSAGRESARGDS
SVETREESEGTGGQRSACAMGGPGTKSGEPLCPPLLCNQDKETLTLLIQVPRIQPQSLQGDLNPLWYKLR
FSAQDLVYSFFLQFAPENKLSTTEPVISISSNNAVIELAKSPESHGHWREWYYGVNNDSLEERLFVNEEN
VNEFLEEVLSSPFKQSMSLTPPLIEVLQVTDNKIQINAKLQECSNSDQLQGKEERVNEESHLTEKEYIEH
CNTPTTDSDSSIAVKALQIDSFGLVTCFQQESLDVSQMILGKSQQPESKMQSEFIKEKSATCSNEEKDNL
NESVITEEKETDGDHLSSLLNKTTVHNIPGFDSIKETNMQDGSVQVIKDHVTNCAFSFQNSLLYDLD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH