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Report for CCDS91247.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91247.1 Public Homo sapiens 10 CABCOCO1 24 110 108 CCDS HistoryNCBI Gene:219621Re-query CCDS DB by CCDS ID:91247.1Re-query CCDS DB by GeneID:219621See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91247.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000648843.3 ENSP00000496918.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000648843.3Link to Ensembl Protein Viewer:ENSP00000496918.2Re-query CCDS DB by Nucleotide ID:ENST00000648843Re-query CCDS DB by Protein ID:ENSP00000496918
Original member Current member NCBI NM_001366906.2 NP_001353835.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001366906.2Link to Protein Sequence:NP_001353835.1Re-query CCDS DB by Nucleotide ID:NM_001366906Re-query CCDS DB by Protein ID:NP_001353835Link to BLAST:NP_001353835.1

Chromosomal Locations for CCDS 91247.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 61662973 61663032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 61672632 61672735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 61681143 61681312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 61686041 61686185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 61690549 61690621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 61760059 61760181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 61760863 61761003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 61765939 61766013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (891 nt):
ATGTCGCAGGGGACGACTCCCTGGGGGCCGACCCCGGCGGGAACCACGCCCGAATCGGAGAGAGACACTG
AATTCCAGGAGCATGAAAAGATTCTGTCTCCGGATTTTCTTTCAGTTGCCCAAATCACTGATTTGTTAAT
GGAGGACATCGATGGAGTTCAAGAAAAACTGAGAATATTTTTGAATTTCAAAAACCTTGAAACTTGTTTA
AAGGATGCCATTCTACTAGATTATTATGTATCTGGATTTTTGTGGGCTAGAGGAATGGATTTCTCTATTA
TTCAGTATTCAAAATTTATGACTTTACTAGCTATGTCACTTCAAAATCTTAAAACACTACATATGTCCTT
AGAGGAAAGCATAAAATGGCTTGGAGAAGTTATGGCTGAAATAGGACCAACACATTCGCAAAAGAGTGAG
GACTGGAATATCTTTGATGTAAAACAAGCCAATGCTATCATTGATTACTTAAAAATCAGCTTATTTCAAC
ACTACAAGCTATACGAGTTTATGTTCTACTCTGCCAGGGAAGAAATTGTGATAGGAACTGAGCAAGTGAT
AGAGGTTGTCAAGTCTGCATGTGGCCCTTTCCCAAATCCTCTGGAAGAAGGAATCTCATTTGATATTTAT
TCAACATTCATAGAGCCCCCCACAATATTGGATACGGAAATGAAGAGGTTGGATCAAGAACAAGGCCCTG
AGGAGTCTCAGCCAGAAACTGACACCTCAGACATGGATCCTTTAGTTGGTTTTACCATTGAAGATGTAAA
ATCAGTGCTGGATCAAGTCACAGATGACATTTTAATCGGCATTCAGACCGAGATAAACGAAAAACTGCAA
ATACAGGAAGAGGCCTTTAATGCACGAATAGAAAAATTGAAAAAGGCCTAA

Translation (296 aa):
MSQGTTPWGPTPAGTTPESERDTEFQEHEKILSPDFLSVAQITDLLMEDIDGVQEKLRIFLNFKNLETCL
KDAILLDYYVSGFLWARGMDFSIIQYSKFMTLLAMSLQNLKTLHMSLEESIKWLGEVMAEIGPTHSQKSE
DWNIFDVKQANAIIDYLKISLFQHYKLYEFMFYSAREEIVIGTEQVIEVVKSACGPFPNPLEEGISFDIY
STFIEPPTILDTEMKRLDQEQGPEESQPETDTSDMDPLVGFTIEDVKSVLDQVTDDILIGIQTEINEKLQ
IQEEAFNARIEKLKKA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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