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Report for CCDS86920.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86920.1 Public Homo sapiens 2 ABCB6 24 110 108 CCDS HistoryNCBI Gene:10058Re-query CCDS DB by CCDS ID:86920.1Re-query CCDS DB by GeneID:10058See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86920.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295750.5 ENSP00000295750.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000295750.5Link to Ensembl Protein Viewer:ENSP00000295750.5Re-query CCDS DB by Nucleotide ID:ENST00000295750Re-query CCDS DB by Protein ID:ENSP00000295750
Original member Current member NCBI NM_001349828.2 NP_001336757.1 Accepted alive Link to Nucleotide Sequence:NM_001349828.2Link to Protein Sequence:NP_001336757.1Re-query CCDS DB by Nucleotide ID:NM_001349828Re-query CCDS DB by Protein ID:NP_001336757Link to BLAST:NP_001336757.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001336757.1 796 Q9NP58-4 796 100% 0 0

Chromosomal Locations for CCDS 86920.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 219209938 219210046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219210230 219210298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219210381 219210475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219210711 219210823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219210934 219211108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219212387 219212491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219213008 219213065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219213241 219213326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219213439 219213502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219213590 219213666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219213826 219213951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219214121 219214186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219214389 219214498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219214961 219215082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219215997 219216180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219216364 219216465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219216652 219216832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219218125 219218673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2391 nt):
ATGGTGACTGTGGGCAACTACTGCGAGGCCGAAGGGCCCGTGGGTCCGGCCTGGATGCAGGATGGCCTGA
GTCCCTGCTTCTTCTTCACGCTCGTGCCCTCGACGCGGATGGCTCTGGGGACTCTGGCCTTGGTGCTGGC
TCTTCCCTGCAGACGCCGGGAGCGGCCCGCTGGTGCTGATTCGCTGTCTTGGGGGGCCGGCCCTCGCATC
TCTCCCTACGTGCTGCAGCTGCTTCTGGCCACACTTCAGGCGGCGCTGCCCCTGGCCGGCCTGGCTGGCC
GGGTGGGCACTGCCCGGGGGGCCCCACTGCCAAGCTATCTACTTCTGGCCTCCGTGCTGGAGAGTCTGGC
CGGCGCCTGTGGCCTGTGGCTGCTTGTCGTGGAGCGGAGCCAGGCACGGCAGCGTCTGGCAATGGGCATC
TGGATCAAGTTCAGGCACAGCCCTGGTCTCCTGCTCCTCTGGACTGTGGCGTTTGCAGCTGAGAACTTGG
CCCTGGTGTCTTGGAACAGCCCACAGTGGTGGTGGGCAAGGGCAGACTTGGGCCAGCAGGTTCGGTCAGC
AGCCCAACAGTCTACCTGGCGAGATTTTGGCAGGAAGCTCCGCCTCCTGAGTGGCTACCTGTGGCCTCGA
GGGAGTCCAGCTCTGCAGCTGGTGGTGCTCATCTGCCTGGGGCTCATGGGTTTGGAACGGGCACTCAATG
TGTTGGTGCCTATATTCTATAGGAACATTGTGAACTTGCTGACTGAGAAGGCACCTTGGAACTCTCTGGC
CTGGACTGTTACCAGTTACGTCTTCCTCAAGTTCCTCCAGGGGGGTGGCACTGGCAGTACAGGCTTCGTG
AGCAACCTGCGCACCTTCCTGTGGATCCGGGTGCAGCAGTTCACGTCTCGGCGGGTGGAGCTGCTCATCT
TCTCCCACCTGCACGAGCTCTCACTGCGCTGGCACCTGGGGCGCCGCACAGGGGAGGTGCTGCGGATCGC
GGATCGGGGCACATCCAGTGTCACAGGGCTGCTCAGCTACCTGGTGTTCAATGTCATCCCCACGCTGGCC
GACATCATCATTGGCATCATCTACTTCAGCATGTTCTTCAACGCCTGGTTTGGCCTCATTGTGTTCCTGT
GCATGAGTCTTTACCTCACCCTGACCATTGTGGTCACTGAGTGGAGAACCAAGTTTCGTCGTGCTATGAA
CACACAGGAGAACGCTACCCGGGCACGAGCAGTGGACTCTCTGCTAAACTTCGAGACGGTGAAGTATTAC
AACGCCGAGAGTTACGAAGTGGAACGCTATCGAGAGGCCATCATCAAATATCAGGGTTTGGAGTGGAAGT
CGAGCGCTTCACTGGTTTTACTAAATCAGACCCAGAACCTGGTGATTGGGCTCGGGCTCCTCGCCGGCTC
CCTGCTTTGCGCATACTTTGTCACTGAGCAGAAGCTACAGGTTGGGGACTATGTGCTCTTTGGCACCTAC
ATTATCCAGCTGTACATGCCCCTCAATTGGTTTGGCACCTACTACAGGATGATCCAGACCAACTTCATTG
ACATGGAGAACATGTTTGACTTGCTGAAAGAGGAGACAGAAGTGAAGGACCTTCCTGGAGCAGGGCCCCT
TCGCTTTCAGAAGGGCCGTATTGAGTTTGAGAACGTGCACTTCAGCTATGCCGATGGGCGGGAGACTCTG
CAGGACGTGTCTTTCACTGTGATGCCTGGACAGACACTTGCCCTGGTGGGCCCATCTGGGGCAGGGAAGA
GCACAATTTTGCGCCTGCTGTTTCGCTTCTACGACATCAGCTCTGGCTGCATCCGAATAGATGGGCAGGA
CATTTCACAGGTGACCCAGGCCTCTCTCCGGTCTCACATTGGAGTTGTGCCCCAAGACACTGTCCTCTTT
AATGACACCATCGCCGACAATATCCGTTACGGCCGTGTCACAGCTGGGAATGATGAGGTGGAGGCTGCTG
CTCAGGCTGCAGGCATCCATGATGCCATTATGGCTTTCCCTGAAGGGTACAGGACACAGGTGGGCGAGCG
GGGACTGAAGCTGAGCGGCGGGGAGAAGCAGCGCGTCGCCATTGCCCGCACCATCCTCAAGGCTCCGGGC
ATCATTCTGCTGGATGAGGCAACGTCAGCGCTGGATACATCTAATGAGAGGGCCATCCAGGCTTCTCTGG
CCAAAGTCTGTGCCAACCGCACCACCATCGTAGTGGCACACAGGCTCTCAACTGTGGTCAATGCTGACCA
GATCCTCGTCATCAAGGATGGCTGCATCGTGGAGAGGGGACGACACGAGGCTCTGTTGTCCCGAGGTGGG
GTGTATGCTGACATGTGGCAGCTGCAGCAGGGACAGGAAGAAACCTCTGAAGACACTAAGCCTCAGACCA
TGGAACGGTGA

Translation (796 aa):
MVTVGNYCEAEGPVGPAWMQDGLSPCFFFTLVPSTRMALGTLALVLALPCRRRERPAGADSLSWGAGPRI
SPYVLQLLLATLQAALPLAGLAGRVGTARGAPLPSYLLLASVLESLAGACGLWLLVVERSQARQRLAMGI
WIKFRHSPGLLLLWTVAFAAENLALVSWNSPQWWWARADLGQQVRSAAQQSTWRDFGRKLRLLSGYLWPR
GSPALQLVVLICLGLMGLERALNVLVPIFYRNIVNLLTEKAPWNSLAWTVTSYVFLKFLQGGGTGSTGFV
SNLRTFLWIRVQQFTSRRVELLIFSHLHELSLRWHLGRRTGEVLRIADRGTSSVTGLLSYLVFNVIPTLA
DIIIGIIYFSMFFNAWFGLIVFLCMSLYLTLTIVVTEWRTKFRRAMNTQENATRARAVDSLLNFETVKYY
NAESYEVERYREAIIKYQGLEWKSSASLVLLNQTQNLVIGLGLLAGSLLCAYFVTEQKLQVGDYVLFGTY
IIQLYMPLNWFGTYYRMIQTNFIDMENMFDLLKEETEVKDLPGAGPLRFQKGRIEFENVHFSYADGRETL
QDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLF
NDTIADNIRYGRVTAGNDEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPG
IILLDEATSALDTSNERAIQASLAKVCANRTTIVVAHRLSTVVNADQILVIKDGCIVERGRHEALLSRGG
VYADMWQLQQGQEETSEDTKPQTMER


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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