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Report for CCDS81976.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81976.1 Public Homo sapiens 16 TP53TG3F 24 110 108 CCDS HistoryNCBI Gene:102724127Re-query CCDS DB by CCDS ID:81976.1Re-query CCDS DB by GeneID:102724127See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81976.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000623042.2 ENSP00000485635.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000623042.2Link to Ensembl Protein Viewer:ENSP00000485635.1Re-query CCDS DB by Nucleotide ID:ENST00000623042Re-query CCDS DB by Protein ID:ENSP00000485635
Original member Current member NCBI NM_001330066.2 NP_001316995.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001330066.2Link to Protein Sequence:NP_001316995.1Re-query CCDS DB by Nucleotide ID:NM_001330066Re-query CCDS DB by Protein ID:NP_001316995Link to BLAST:NP_001316995.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001316995.1 124 Q9ULZ0-2 124 100% 0 0

Chromosomal Locations for CCDS 81976.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 33459680 33460041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 33461213 33461225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (375 nt):
ATGCGCGCCTCACCCTGCATCTCCCAGCCCGCAGCCAGCTGGCATCCTAGACCCTCTGCCCTGCGACCAA
CAGCCGGGAGCGGACCAGACACCAGAACTCCCGGAACGGTTGAAGACGGTTCCGCTCCCTGTCCCGCCTT
TCGCAGCCCAGCAGTTTCGCCCTGCGGAGAGGAGCCTTGCTGTTTCCAAATCTCTCCTGCTGAAGAGACA
TTGGAGCTAGGGCGGCTAGTTTCACCTGGTAATTGTGACACCCTGTCTCCTCGAGCTGCAGGCTTTTATG
CTTGTCATGTTCGAAGTTTGATACCTTGCAGATCAACAAAGGGCCGGTGGCCTCTCACTGCCTCCGCGGC
AGGGTTGTCAAGTTTTTCAGGTTAA

Translation (124 aa):
MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISPAEET
LELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLSSFSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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