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Report for CCDS58603.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58603.1 Public Homo sapiens 17 CEP295NL 24 110 108 CCDS HistoryNCBI Gene:100653515Re-query CCDS DB by CCDS ID:58603.1Re-query CCDS DB by GeneID:100653515See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58603.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000322630.3 ENSP00000312767.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000322630.3Link to Ensembl Protein Viewer:ENSP00000312767.2Re-query CCDS DB by Nucleotide ID:ENST00000322630Re-query CCDS DB by Protein ID:ENSP00000312767
Original member Current member EBI ENST00000619342.1 ENSP00000483863.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000619342.1Link to Ensembl Protein Viewer:ENSP00000483863.1Re-query CCDS DB by Nucleotide ID:ENST00000619342Re-query CCDS DB by Protein ID:ENSP00000483863
Original member Current member NCBI NM_001243540.2 NP_001230469.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001243540.2Link to Protein Sequence:NP_001230469.1Re-query CCDS DB by Nucleotide ID:NM_001243540Re-query CCDS DB by Protein ID:NP_001230469Link to BLAST:NP_001230469.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001230469.1 621 Q96MC4 621 100% 0 0

Chromosomal Locations for CCDS 58603.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 78890638 78892459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 78901785 78901828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1866 nt):
ATGTGTTCTGGGTGGTCTAGCTCAGTCATCTGGAGACACACACAGTTTGCTGTGGAACGTTGTGGCTTCT
GTGGCTCCTCAGGCCCGGGGGCGCCCCTTGAACCCTCCACTCTTGGCTCCAAGCACCTTCCCTGGGAAGC
TGTATCTGCTGGGTTCGCAGACAGGAACAGAAACATGGATGGAGCCATGTGGCTGAGCCTCTGTCCTGAT
AACGAAGACCTGCTTTGGAGGAAAAAGCACAAATTGCTACAAGCCCGGGGCAAAGGCGATCTCGCTCTGC
AGAGAAGAGCGGATGCCAAGCTGTGGAAAAACTACCAGCTCCAGCGCTTGGCTGAGGAGTTGAGGAGAGG
GTATCAGGAGGCACAGCACCTGCACGTCGGTGGCCTGGACAGGCTGCAGTCAGCACGTCTGTTGGGCTGG
GGAGGAGGACGGGCCAGGGAAAATGAGCCTGACTCGCAGGGGCCCATCCAGCGAAGATCAGCCAGGCCCC
CGAGGGCCAAGGAGAAGCATAGAGCAGCCCTTAGTGAAGAGAGGAGTTGCAGGGAAGAGTTGGGCCAGCA
ACACCCCAGGCACTCCAGGCCCCGGAAGACAGCAGCGAGTCCAGAGAAACCACAGACTACAAAAGCCACG
GGTCGGATGAATTCTCACCTGGCCCCGCCTGAGAAGAGAAAGGGAAGGCCAGAACCTTCGACCAAGTCTG
GGGGTGGCCGCTGTGCCATCCATCCTCGGAGGAGCAAAGGGGCGGACCTAGAAAGGTCAAACCCACTCGT
GGCTGCTGTGGGAGAAATCGGGCTTGTGGAGGAAAAAGAGAAAGGAACAGCTCGGGCGGGGAGGAGGCAA
CTGGGAAAGGGGGCAGTTTGCTTTGTTCCAGCCCTGACCAGTCGCTCTCAGGGACAGAGTCTGGAGGGGA
AGCTGAGAGACCTCGGGCAGCTGTGGCCAGCTGATTCCAGCTGCAGAAGGGAAGCCGTGTCCCCAGCATC
TCAGTGCACGCTCCGGGAGAAGAACAAGTGGCAGAAAGAGCTGGAGTTGGCCTTTGAAGAGTTGTTTAAT
ATAAACAGAAAGCTGAAAAAACACCTGTGCTTGTACCTGGCACTGAAGCCCAGGATGGACCAGAGACCTG
GGGAAGGGCATGCCTTCTCAGAGATGCAAGAGTGTGGCGCTGGGACCCCAAGAGGGAAGAAAATGGCAGA
CCCAGAGATGCTGCCTGCCGGGGAACCCAGGAGCCCAGCAGAGGAGGAGGCGCAGCAGGCAGCGTCCAAG
ACCGACTTGAAAACGTTCATGGGCAAGGCCCAGAACCAAAAATATCAGGGCACGGTCAAGCCCACGTTTA
GAAATGGAAGTCAAACATTGTCTCCCGAGGCAGGTATATTTATCAACAAAGAGGACTCATTATTGTATAG
CACTGAATCTGGACAAGAGACCCCCAAACTGGGCACGCTGGCAGAGGGCTCCCTTCAGCTCCACCTTCAA
GACCAGGCAGACAGAGTGGGCTCGACGGCATCCAGGCAAAGGCAGAAAGCAGAGATGGAGCAGAGAAGAC
AAAAACAACTGGAATCGCTTGAACAAATGGAACACCCAGATATGAGCTTGGAAATCCACTACAAAGCTGA
GCTAGAAAAAGAGAGGAGGGAGCAAAGAAGAGCTCGACTGGCCCATCTGAAGTCCTCCTCCACGAGAGCC
CAGGAAAGGGAGAGAGGATCTGAGCTCAGCACCACTTCCCCATCGGGCACCAGCCTCGCCGACGACGACC
GGCACAGTCAGATGATCCGAGACCAGCAGCAGCAGATCTTACAGCAAAACAGGTTGCACAAGCAGTTTCT
TGAAGAAGCCCGGAAATGCTTGCGGGAGTTTCAGAACATATGCTAA

Translation (621 aa):
MCSGWSSSVIWRHTQFAVERCGFCGSSGPGAPLEPSTLGSKHLPWEAVSAGFADRNRNMDGAMWLSLCPD
NEDLLWRKKHKLLQARGKGDLALQRRADAKLWKNYQLQRLAEELRRGYQEAQHLHVGGLDRLQSARLLGW
GGGRARENEPDSQGPIQRRSARPPRAKEKHRAALSEERSCREELGQQHPRHSRPRKTAASPEKPQTTKAT
GRMNSHLAPPEKRKGRPEPSTKSGGGRCAIHPRRSKGADLERSNPLVAAVGEIGLVEEKEKGTARAGRRQ
LGKGAVCFVPALTSRSQGQSLEGKLRDLGQLWPADSSCRREAVSPASQCTLREKNKWQKELELAFEELFN
INRKLKKHLCLYLALKPRMDQRPGEGHAFSEMQECGAGTPRGKKMADPEMLPAGEPRSPAEEEAQQAASK
TDLKTFMGKAQNQKYQGTVKPTFRNGSQTLSPEAGIFINKEDSLLYSTESGQETPKLGTLAEGSLQLHLQ
DQADRVGSTASRQRQKAEMEQRRQKQLESLEQMEHPDMSLEIHYKAELEKERREQRRARLAHLKSSSTRA
QERERGSELSTTSPSGTSLADDDRHSQMIRDQQQQILQQNRLHKQFLEEARKCLREFQNIC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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