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Report for CCDS56924.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56924.1 Public Mus musculus 14 Gm3500 23 108 98 CCDS HistoryNCBI Gene:100041678Re-query CCDS DB by CCDS ID:56924.1Re-query CCDS DB by GeneID:100041678See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56924.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000177986.7 ENSMUSP00000137355.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000177986.7Link to Ensembl Protein Viewer:ENSMUSP00000137355.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000177986Re-query CCDS DB by Protein ID:ENSMUSP00000137355
Original member Current member NCBI NM_001256886.1 NP_001243815.1 Accepted alive Link to Nucleotide Sequence:NM_001256886.1Link to Protein Sequence:NP_001243815.1Re-query CCDS DB by Nucleotide ID:NM_001256886Re-query CCDS DB by Protein ID:NP_001243815Link to BLAST:NP_001243815.1

Chromosomal Locations for CCDS 56924.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 5366927 5366936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 5370437 5370619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 5371295 5371426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 5372377 5372539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 5373272 5373401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (618 nt):
ATGTTTTCCTGGCTGCTCAGGCTATTTCAGAAAGAGAATGGCGATGAAGGAGAGACCAGACCAACAGAGA
AGGAAGAGGGAATCCTTTCTCATGAAAAAGGAAGAAGGAAATCATTCTGGAGAAGGCACAGGTCTGCTAG
AAATACTTCAACCCAAAATTCCAAAATGACTAAGAAGAGATCAAAAATAAATGAACTAGAAGAACTGAAA
TTGGATATGAGGAAGATCAGCAATGACATGGAGGAAATGTGTGGAATCCTGAACCTTTACATGTATGAGG
ATTTGAACTACAGGATGAACACTGAATTCAACATCATTAAATCACAACATGAGAAGACAATGTTGGATAT
GAATAAAATGATCCAGTCCATAATTGGTTCCATGCAGTATTCCAAGGAACTGATAGAAGATAACTATTCC
TACAGCATTAAGGAGGACCACCTCCTCCGTGAGTGCACTCAACTCAACGAAAACGTAAGGATATTACTGA
ATGAGAACAGAAGGCTGCTGGTGGAGCAGGCTGGCCATAAGTGTCCTGTGGGGAAGAAAAGAGGTTCTCT
GAGGAGGCCAGGAAGTACATCTGTGTCCCAAGTGCCAAGGAACAGCAGTGTGATATAG

Translation (205 aa):
MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKINELEELK
LDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYS
YSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPGSTSVSQVPRNSSVI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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