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Report for CCDS40566.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40566.1 Public Mus musculus 9 Glb1l2 23 108 98 CCDS HistoryNCBI Gene:244757Re-query CCDS DB by CCDS ID:40566.1Re-query CCDS DB by GeneID:244757See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40566.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000040398.13 ENSMUSP00000047128.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000040398.13Link to Ensembl Protein Viewer:ENSMUSP00000047128.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000040398Re-query CCDS DB by Protein ID:ENSMUSP00000047128
Original member Current member NCBI NM_153803.2 NP_722498.1 Accepted alive Link to Nucleotide Sequence:NM_153803.2Link to Protein Sequence:NP_722498.1Re-query CCDS DB by Nucleotide ID:NM_153803Re-query CCDS DB by Protein ID:NP_722498Link to BLAST:NP_722498.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_722498.1 652 Q3UPY5-2 652 99.8466% 0 1

Chromosomal Locations for CCDS 40566.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 26764737 26764823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26765102 26765218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26765580 26765691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26765985 26766072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26767077 26767155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26767395 26767466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26767720 26767860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26768419 26768525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26769036 26769116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26769740 26769877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26771028 26771112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26773973 26774043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26778019 26778100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26780674 26780766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26791782 26791890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26794083 26794178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26794786 26794854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26796406 26796603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26797045 26797092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26806298 26806383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1959 nt):
ATGCCCAAGTGGAGTCTGCGGCGGAGGCCAGGCCGCACACTCGGACTCCTGCTGCTGCTGGTCTTGAGCT
TCCTGGTGCTCCGCAGGTATCTGAATCCCAAGGTGGGCAGCTGTGACCATGAGGGGGCTCTGAGGTTGAA
CTGGAGCACTCTGGTTCCCCTATGGCTCCAACATCAGCGCCTGGGACTTCGAACAAAAGGCCCAGACTTC
ATTCTGGAGGACTCCATCTTTCAGATTCTGGGGGGATCCATACACTATTTCCGTGTACCCAGGGAATACT
GGAGGGACCGCCTGCTCAAATTGAAAGCCTGTGGCTTGAATACCCTTACCACCTATGTGCCATGGAACCT
CCATGAGCCAGAAAGAGGCAAATTCGACTTCTCCGGGAACCTGGACCTAGAGGCCTTTATCCAGCTGGCT
GCAAAGATCGGGCTGTGGGTGATTCTGCGACCAGGGCCCTACATCTGTAGTGAGATTGACCTCGGGGGCT
TGCCCAGCTGGCTCCTCCAAGACCCTGACATGAAGCTGAGGACAACCTACCACGGCTTCACTAAGGCAGT
GGATCTTTACTTTGACCACCTGATGTCCAGGGTGGTGCCACTTCAGTATAAGCATGGAGGACCTATCATC
GCCGTGCAAGTGGAGAATGAATACGGTTCCTATAACAAAGACCGTGCATACATGCCTTACATCAAGAAGG
CTTTGGAAGACAGAGGCATCATTGAGATGCTCCTGACCTCGGACAACAAAGATGGCCTGGAAAAGGGAGT
CGTTGATGGAGTGCTGGCCACCATCAACTTACAGTCGCAACAGGAGCTGATGGCACTAAACACTGTTCTC
TTATCTATACAGGGGATTCAACCCAAGATGGTGATGGAGTACTGGACAGGGTGGTTTGACTCGTGGGGTG
GCTCCCACAATATCTTGGATTCCTCTGAAGTCCTGCAAACAGTGTCTGCCATCATCAAAGACGGCTCCTC
CATCAACCTGTACATGTTCCATGGAGGCACAAATTTTGGCTTCATAAATGGAGCCATGCATTTTAATGAC
TACAAGGCTGATGTTACCAGCTATGACTATGATGCTATACTGACAGAGGCTGGAGACTACACTGCCAAAT
ACACCAAGCTTCGAGAACTCTTTGGAACTGTCTCAGGTATTCCTCCACCTCCTCCACCTGAGCTTACTGC
TAAGATGGTCTATGAGCCAATGAGTCCAGCTCTCTACCTATCACTGTGGGATGCTATCCAGTACATGGAT
AAGCCAGTCACATCTGAGACACCCATCAACATGGAGAACCTGCCAGTAAACAATGGTAATGGGCAGGCCT
TTGGGTATGTTCTGTATGAGACCACTATCTTTTCATCTGGTGTCCTCAGTGGCCTCGTGCGTGACAGAGG
ACAGGTCTTTTTGAATAGAGTATCCATAGGATTCCTGGACTATAAAACAACAAAGATCACTATCCCCTTG
ACCCAGGGTTACACCATACTGAGGATCTTGGTGGAGAATCGTGGGCGAGTCAACTATGGAAATAACATTG
ACAGTCAGCGCAAAGGTTTAATTGGAAATCTCTATCTGAATAATAAAGCTCTGAAAAACTTCAAAATCTA
CAGCCTGGATATGACAAAGCAGTTCCTTCAGAGGTTCGACATGGACAACTGGAGTGTCATACCCAAAGAA
CTGACCTTTCCTGCTTTCTTCCTGGGTGCCTTGTCAGTTGGCATTTACCCTTCTGACACATTTCTGAAGT
TGGAGGGCTGGGTGAAGGGGGTTGTATTCGTTAATGGGCACAACCTTGGACGCTACTGGAATGTAGGACC
TCAGGAGACTCTCTACCTCCCAGGTGTCTGGCTGGACAAAGGAATCAACAAGGTTATCATTTTTGAAGAG
ACAATGTCAGGCTCCATGGTCCAGTCTACTGATATCCCCCACCTGGGCAGGAACCAGTACATTAACTGA

Translation (652 aa):
MPKWSLRRRPGRTLGLLLLLVLSFLVLRRYLNPKVGSCDHEGALRLNWSTLVPLWLQHQRLGLRTKGPDF
ILEDSIFQILGGSIHYFRVPREYWRDRLLKLKACGLNTLTTYVPWNLHEPERGKFDFSGNLDLEAFIQLA
AKIGLWVILRPGPYICSEIDLGGLPSWLLQDPDMKLRTTYHGFTKAVDLYFDHLMSRVVPLQYKHGGPII
AVQVENEYGSYNKDRAYMPYIKKALEDRGIIEMLLTSDNKDGLEKGVVDGVLATINLQSQQELMALNTVL
LSIQGIQPKMVMEYWTGWFDSWGGSHNILDSSEVLQTVSAIIKDGSSINLYMFHGGTNFGFINGAMHFND
YKADVTSYDYDAILTEAGDYTAKYTKLRELFGTVSGIPPPPPPELTAKMVYEPMSPALYLSLWDAIQYMD
KPVTSETPINMENLPVNNGNGQAFGYVLYETTIFSSGVLSGLVRDRGQVFLNRVSIGFLDYKTTKITIPL
TQGYTILRILVENRGRVNYGNNIDSQRKGLIGNLYLNNKALKNFKIYSLDMTKQFLQRFDMDNWSVIPKE
LTFPAFFLGALSVGIYPSDTFLKLEGWVKGVVFVNGHNLGRYWNVGPQETLYLPGVWLDKGINKVIIFEE
TMSGSMVQSTDIPHLGRNQYIN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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