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Report for CCDS36383.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36383.1 Public Mus musculus 11 Tmem235 23 108 98 CCDS HistoryNCBI Gene:546519Re-query CCDS DB by CCDS ID:36383.1Re-query CCDS DB by GeneID:546519See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36383.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000093905.2 ENSMUSP00000091432.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000093905.2Link to Ensembl Protein Viewer:ENSMUSP00000091432.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000093905Re-query CCDS DB by Protein ID:ENSMUSP00000091432
Original member Current member NCBI NM_001085535.1 NP_001079004.1 Accepted alive Link to Nucleotide Sequence:NM_001085535.1Link to Protein Sequence:NP_001079004.1Re-query CCDS DB by Nucleotide ID:NM_001085535Re-query CCDS DB by Protein ID:NP_001079004Link to BLAST:NP_001079004.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001079004.1 211 B1AQL3 211 100% 0 0

Chromosomal Locations for CCDS 36383.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 117860752 117860926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117862228 117862308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117862875 117863012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117864118 117864359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (636 nt):
ATGGCCCTGCTAGCCACCTTGCTCCTGAGCGCAGCCCTGGGCGCCTTACTCAGCTTCGCGCTGCTGGCAG
CGGCTGTCGCCAGCGACTACTGGTACATCCTGGAGGTGGCGGACGCTGGCGGCCTCGGTGGCGTGCAGCT
CTTCTCGCATTCCGGGCTCTGGCGCACCTGTGAAGGGCAGAACAGCTGCGTGCCCCTGATTGACCCATTT
GCCAGTGCCGGCCTGGAAGTTTCTCCCTCCGTACAGCACCTGCTCTCCCTGCATCGCACAGTCATGGTAG
TCTTGCCTCTGAGCCTCGTCCTCATCGTATGTGGTTGGGTCTGCGGCTTGCTCAGCTCCCTATCCCAGAG
TGTCCCTCTGCTGCTGGCCACTGGCTGCTACTTCTTGCTAGGGGGTGCCCTGACCCTGGCAGGGCTCAGC
ATCTACATCAGCTACTCACACCTGGCATTCGTGGAGGCGGCCCGCACGTACGGCGTGACGCACGTGCAGA
ACGTGCACATCAGCTTCGGCTGGTCACTGGCCCTGGCCTGGGCCTCCTGCGCCTCGGAGGTGCTCAGCGG
GGCCCTCCTGCTCGCAGCTGCCCGGCTCCTCAGCCTGAGCCAGCGCCCAGGAGTGCCCCACTCTGTGATC
CTCTGA

Translation (211 aa):
MALLATLLLSAALGALLSFALLAAAVASDYWYILEVADAGGLGGVQLFSHSGLWRTCEGQNSCVPLIDPF
ASAGLEVSPSVQHLLSLHRTVMVVLPLSLVLIVCGWVCGLLSSLSQSVPLLLATGCYFLLGGALTLAGLS
IYISYSHLAFVEAARTYGVTHVQNVHISFGWSLALAWASCASEVLSGALLLAAARLLSLSQRPGVPHSVI
L


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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