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Report for CCDS30896.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30896.1 Public Homo sapiens 1 OR10K2 24 110 108 CCDS HistoryNCBI Gene:391107Re-query CCDS DB by CCDS ID:30896.1Re-query CCDS DB by GeneID:391107See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30896.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641042.1 ENSP00000493297.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641042.1Link to Ensembl Protein Viewer:ENSP00000493297.1Re-query CCDS DB by Nucleotide ID:ENST00000641042Re-query CCDS DB by Protein ID:ENSP00000493297
Original member Current member NCBI NM_001004476.2 NP_001004476.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004476.2Link to Protein Sequence:NP_001004476.1Re-query CCDS DB by Nucleotide ID:NM_001004476Re-query CCDS DB by Protein ID:NP_001004476Link to BLAST:NP_001004476.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004476.1 312 Q6IF99 312 100% 0 0

Chromosomal Locations for CCDS 30896.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 158419928 158420866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGAGCGGGTCAATGAGACTGTGGTGAGAGAGGTCATCTTCCTCGGCTTCTCATCCCTGGCCAGGCTGC
AGCAGCTGCTCTTTGTTATCTTCCTGCTCCTCTACCTGTTCACTCTGGGCACCAATGCAATCATCATTTC
CACCATTGTCCTGGACAGGGCCCTTCATATCCCCATGTACTTCTTCCTTGCCATCCTCTCTTGCTCTGAG
ATTTGCTACACCTTCATCATTGTACCCAAGATGCTGGTTGACCTGCTGTCCCAGAAGAAGACCATTTCTT
TCCTGGGCTGTGCCATCCAAATGTTTTCCTTCCTCTTCCTTGGCTGCTCTCACTCCTTTCTGCTGGCAGT
CATGGGTTATGATCGTTACATAGCCATCTGTAACCCACTGCGCTACTCAGTGCTAATGGGACATGGGGTG
TGTATGGGACTAGTGGCTGCTGCCTGTGCCTGTGGCTTCACTGTTGCACAGATCATCACATCCTTGGTAT
TTCACCTGCCTTTTTATTCCTCCAATCAACTACATCACTTCTTCTGTGACATTGCTCCTGTCCTCAAGCT
GGCATCTCACCATAACCACTTTAGTCAGATTGTCATCTTCATGCTCTGTACATTGGTCCTGGCTATCCCC
TTATTGTTGATCTTGGTGTCCTATGTTCACATCCTCTCTGCCATACTTCAGTTTCCTTCCACACTGGGTA
GGTGCAAAGCTTTTTCTACCTGTGTATCTCACCTCATTATTGTCACTGTCCACTATGGCTGTGCCTCCTT
TATCTACTTAAGGCCTCAGTCCAACTACTCCTCAAGCCAGGATGCTCTAATATCAGTATCCTACACTATT
ATAACTCCATTGTTCAACCCAATGATTTATAGCTTGAGAAATAAAGAGTTCAAATCAGCTCTTTGTAAAA
TTGTGAGAAGAACAATTTCCCTGTTGTAA

Translation (312 aa):
MERVNETVVREVIFLGFSSLARLQQLLFVIFLLLYLFTLGTNAIIISTIVLDRALHIPMYFFLAILSCSE
ICYTFIIVPKMLVDLLSQKKTISFLGCAIQMFSFLFLGCSHSFLLAVMGYDRYIAICNPLRYSVLMGHGV
CMGLVAAACACGFTVAQIITSLVFHLPFYSSNQLHHFFCDIAPVLKLASHHNHFSQIVIFMLCTLVLAIP
LLLILVSYVHILSAILQFPSTLGRCKAFSTCVSHLIIVTVHYGCASFIYLRPQSNYSSSQDALISVSYTI
ITPLFNPMIYSLRNKEFKSALCKIVRRTISLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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