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Report for CCDS22182.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22182.1 Public Mus musculus 8 Ikbkb 23 108 98 CCDS HistoryNCBI Gene:16150Re-query CCDS DB by CCDS ID:22182.1Re-query CCDS DB by GeneID:16150See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22182.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000063401.9 ENSMUSP00000064235.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000063401.9Link to Ensembl Protein Viewer:ENSMUSP00000064235.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000063401Re-query CCDS DB by Protein ID:ENSMUSP00000064235
Original member NCBI NM_010546.2 NP_034676.1 Updated not alive Link to Nucleotide Sequence:NM_010546.2Link to Protein Sequence:NP_034676.1Re-query CCDS DB by Nucleotide ID:NM_010546Re-query CCDS DB by Protein ID:NP_034676
Current member NCBI NM_010546.3 NP_034676.1 Accepted alive Link to Nucleotide Sequence:NM_010546.3Link to Protein Sequence:NP_034676.1Re-query CCDS DB by Nucleotide ID:NM_010546Re-query CCDS DB by Protein ID:NP_034676Link to BLAST:NP_034676.1

Chromosomal Locations for CCDS 22182.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 22661390 22661492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22663690 22663817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22665489 22665636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22665812 22665911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22665991 22666040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22667224 22667333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22668684 22668745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22668945 22669096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22669607 22669730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22671631 22671745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22672323 22672517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22673363 22673492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22674963 22675070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22678790 22678914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22681663 22681752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22682726 22682814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22691058 22691127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22693815 22693932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22695163 22695257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22706082 22706186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2217 nt):
ATGAGCTGGTCACCGTCCCTCCCAACCCAGACATGTGGAGCCTGGGAAATGAAAGAACGCCTGGGGACCG
GGGGATTTGGAAACGTCATCCGGTGGCACAATCAGGCGACAGGTGAACAGATCGCCATCAAGCAATGCCG
ACAGGAGCTCAGCCCAAAGAACAGAGACCGCTGGTGCCTCGAAATCCAGATCATGAGAAGGCTGAACCAT
CCCAATGTGGTGGCTGCCCGGGATGTCCCAGAGGGGATGCAGAACCTGGCACCCAATGATTTGCCACTGC
TGGCCATGGAGTACTGCCAAGGAGGAGATCTCCGAAGATACTTGAACCAGTTCGAGAACTGCTGTGGCCT
GCGGGAAGGAGCTGTCCTTACCCTGCTGAGTGACATCGCATCGGCTCTTAGATACCTTCACGAAAACAGA
ATCATCCATCGAGACCTGAAGCCAGAAAACATCGTTCTGCAGCAAGGAGAGAAAAGATTAATACACAAAA
TTATTGATCTAGGATATGCCAAGGAGCTGGATCAGGGCAGTCTGTGCACGTCATTTGTGGGGACTCTGCA
ATACCTGGCGCCAGAGCTTCTGGAGCAGCAGAAGTACACCGTGACCGTTGACTACTGGAGCTTCGGCACC
CTGGCCTTCGAGTGCATCACTGGCTTCCGGCCCTTCCTCCCTAACTGGCAGCCTGTGCAGTGGCACTCCA
AAGTCCGGCAGAAGAGCGAAGTGGACATCGTTGTTAGTGAAGACTTGAATGGAGCAGTGAAGTTTTCAAG
TTCGCTACCCTTCCCCAATAATCTTAACAGTGTCTTGGCTGAACGGCTGGAGAAGTGGCTGCAGCTGATG
CTTATGTGGCACCCTCGGCAAAGGGGCACGGATCCCCAGTATGGCCCCAACGGCTGCTTCAGAGCCCTGG
ATGACATCTTGAACTTGAAGCTGGTTCATGTCTTGAACATGGTCACAGGCACCGTTCACACATACCCCGT
GACGGAGGATGAGAGTCTGCAGAGCTTAAAAACCAGAATCCAGGAAGACACGGGGATCCTGGAGACAGAC
CAGGAGCTGCTGCAAGAGGCAGGGCTGGTGCTGCTCCCTGACAAGCCTGCTACTCAGTGCATCTCAGACA
GCAAGACAAACGAGGGCCTCACGTTGGACATGGATCTTGTTTTTCTCTTTGACAACAGTAAAATCAACTA
TGAGACTCAGATCACCCCCCGACCCCAACCGGAAAGTGTCAGCTGTATCCTTCAGGAGCCCAAGCGGAAC
CTCTCCTTCTTCCAGCTGAGGAAAGTGTGGGGCCAAGTCTGGCACAGCATCCAGACGCTGAAGGAAGACT
GTAACCGGCTGCAGCAGGGACAGCGAGCAGCCATGATGAGTCTCCTCCGGAATAACAGCTGCCTCTCTAA
GATGAAGAACGCCATGGCCTCCACGGCCCAGCAGCTCAAGGCCAAGCTGGACTTCTTCAAAACCAGCATC
CAGATCGACCTGGAGAAGTATAAAGAGCAGACCGAGTTTGGGATCACCTCAGATAAATTGCTGCTGGCTT
GGCGGGAGATGGAGCAGGCTGTGGAGCAGTGTGGGCGGGAGAATGACGTGAAGCATCTAGTAGAGCGGAT
GATGGCACTGCAGACTGACATTGTGGACCTGCAGAGGAGCCCGATGGGTCGGAAGCAGGGGGGCACCCTG
GATGACCTAGAGGAACAAGCGAGGGAGCTCTACCGAAGACTCAGGGAGAAGCCAAGAGACCAAAGGACAG
AAGGTGACAGCCAGGAGATGGTACGGCTGCTGCTTCAGGCAATCCAAAGCTTTGAGAAGAAAGTTCGGGT
GATTTATACACAGCTCAGTAAGACCGTGGTTTGTAAGCAGAAGGCACTGGAGTTGCTGCCCAAGGTAGAA
GAGGTAGTGAGCCTTATGAACGAGGACGAGAGGACCGTGGTCCGGCTTCAGGAGAAGCGGCAGAAGGAAC
TCTGGAACCTCCTGAAGATCGCCTGTAGCAAAGTCCGAGGTCCCGTGAGTGGAAGCCCAGACAGCATGAA
TGTGTCTCGACTCAGTCACCCTGGTCAGCTAATGTCCCAGCCTTCCAGTGCCTGTGACAGCTTACCTGAA
TCAGACAAGAAAAGTGAAGAACTGGTGGCCGAAGCCCACGCCCTCTGCTCCCGGCTAGAAAGTGCGCTGC
AGGACACTGTGAAGGAGCAAGACAGAAGCTTCACGGTAACCGCCTGA

Translation (738 aa):
MSWSPSLPTQTCGAWEMKERLGTGGFGNVIRWHNQATGEQIAIKQCRQELSPKNRDRWCLEIQIMRRLNH
PNVVAARDVPEGMQNLAPNDLPLLAMEYCQGGDLRRYLNQFENCCGLREGAVLTLLSDIASALRYLHENR
IIHRDLKPENIVLQQGEKRLIHKIIDLGYAKELDQGSLCTSFVGTLQYLAPELLEQQKYTVTVDYWSFGT
LAFECITGFRPFLPNWQPVQWHSKVRQKSEVDIVVSEDLNGAVKFSSSLPFPNNLNSVLAERLEKWLQLM
LMWHPRQRGTDPQYGPNGCFRALDDILNLKLVHVLNMVTGTVHTYPVTEDESLQSLKTRIQEDTGILETD
QELLQEAGLVLLPDKPATQCISDSKTNEGLTLDMDLVFLFDNSKINYETQITPRPQPESVSCILQEPKRN
LSFFQLRKVWGQVWHSIQTLKEDCNRLQQGQRAAMMSLLRNNSCLSKMKNAMASTAQQLKAKLDFFKTSI
QIDLEKYKEQTEFGITSDKLLLAWREMEQAVEQCGRENDVKHLVERMMALQTDIVDLQRSPMGRKQGGTL
DDLEEQARELYRRLREKPRDQRTEGDSQEMVRLLLQAIQSFEKKVRVIYTQLSKTVVCKQKALELLPKVE
EVVSLMNEDERTVVRLQEKRQKELWNLLKIACSKVRGPVSGSPDSMNVSRLSHPGQLMSQPSSACDSLPE
SDKKSEELVAEAHALCSRLESALQDTVKEQDRSFTVTA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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