NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS21896.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21896.1 Public Mus musculus 7 Rgs10 23 108 98 CCDS HistoryNCBI Gene:67865Re-query CCDS DB by CCDS ID:21896.1Re-query CCDS DB by GeneID:67865See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21896.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033133.11 ENSMUSP00000033133.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033133.11Link to Ensembl Protein Viewer:ENSMUSP00000033133.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000033133Re-query CCDS DB by Protein ID:ENSMUSP00000033133
Original member NCBI NM_026418.2 NP_080694.1 Updated not alive Link to Nucleotide Sequence:NM_026418.2Link to Protein Sequence:NP_080694.1Re-query CCDS DB by Nucleotide ID:NM_026418Re-query CCDS DB by Protein ID:NP_080694
Current member NCBI NM_026418.3 NP_080694.1 Accepted alive Link to Nucleotide Sequence:NM_026418.3Link to Protein Sequence:NP_080694.1Re-query CCDS DB by Nucleotide ID:NM_026418Re-query CCDS DB by Protein ID:NP_080694Link to BLAST:NP_080694.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080694.1 181 Q9CQE5 181 100% 0 0

Chromosomal Locations for CCDS 21896.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 128373896 128374042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128388964 128389107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128403170 128403256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128404359 128404477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128418066 128418114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (546 nt):
ATGTTCACCCGCGCCGTGAGCCGACTGAGCAGGAAGCGGCCGCCGTCTGATATCCATGACGGAGATGGGA
GCTCAAGCAGCGGCCACCAGAGCCTTAAGAGCACAGCCAAGTGGGCATCCTCCCTGGAGAATCTTCTGGA
AGACCCAGAAGGGGTGCAGAGATTCAGGGAGTTTCTGAAGAAGGAATTCAGCGAAGAGAATGTCTTGTTT
TGGCTAGCGTGTGAAGATTTCAAGAAAACGGAGGACAGGAAGCAGATGCAGGAAAAGGCCAAGGAGATCT
ACATGACCTTCCTGTCCAATAAGGCCTCTTCACAAGTCAACGTGGAGGGGCAGTCTCGGCTCACTGAAAA
GATTCTGGAAGAGCCACACCCTCTGATGTTCCAAAAGCTCCAGGACCAGATCTTCAATCTCATGAAGTAT
GACAGCTACAGCCGCTTCTTGAAGTCTGACTTGTTTCTGAAACCCAAGCGAACTGAGGAAGAGGAAGAAG
AGCCCCCGGATGCTCAGACCGCAGCTAAGCGAGCCTCCAGAATTTACAACACATAA

Translation (181 aa):
MFTRAVSRLSRKRPPSDIHDGDGSSSSGHQSLKSTAKWASSLENLLEDPEGVQRFREFLKKEFSEENVLF
WLACEDFKKTEDRKQMQEKAKEIYMTFLSNKASSQVNVEGQSRLTEKILEEPHPLMFQKLQDQIFNLMKY
DSYSRFLKSDLFLKPKRTEEEEEEPPDAQTAAKRASRIYNT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH