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Report for CCDS21603.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21603.1 Public Mus musculus 7 Or51i2 23 108 98 CCDS HistoryNCBI Gene:259075Re-query CCDS DB by CCDS ID:21603.1Re-query CCDS DB by GeneID:259075See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21603.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098183.1 ENSMUSP00000095785.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098183.1Link to Ensembl Protein Viewer:ENSMUSP00000095785.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000098183Re-query CCDS DB by Protein ID:ENSMUSP00000095785
Original member Current member EBI ENSMUST00000213214.1 ENSMUSP00000149866.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213214.1Link to Ensembl Protein Viewer:ENSMUSP00000149866.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213214Re-query CCDS DB by Protein ID:ENSMUSP00000149866
Original member Current member NCBI NM_147072.1 NP_667283.1 Accepted alive Link to Nucleotide Sequence:NM_147072.1Link to Protein Sequence:NP_667283.1Re-query CCDS DB by Nucleotide ID:NM_147072Re-query CCDS DB by Protein ID:NP_667283Link to BLAST:NP_667283.1

Chromosomal Locations for CCDS 21603.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 104039798 104040736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGCGCTGTTCAATGTCACTCACCCTGCCTCCTTTCTCCTGACTGGTATCCCTGGTCTGGAGAGCCTCC
ACCCCTGGCTGGCAGGACCCCTTTGTGTGATGTATGCCGTGGCCCTCGGGGCAAATACTGTGATTCTGCA
GGCTGTGAGAGTGGAGCCCATCCTCCATGCTCCCATGTACTATTTCCTGTCCATGTTGTCTTTCAGTGAT
GTGGCCATGTCAATGGCCACACTGCCCACCGTGCTGAGAACCTTCTGCTTTGATGCCCGCAGCATTGCTT
TTGACGCCTGTCTAGTCCAGATGTTCCTCATTCATTCTTTCTCGATGATGGAGTCAGGGATTCTGCTGGC
TATGAGTTTTGACCGCTATGTGGCCATATGCAATCCCTTGCATTATGCCACTGTCCTCACCAATGAATTC
ATTGCTGGGATGGGCTTAGCTGTGACTGCTCGAAGCTTCATCACCCTTTTCCCTCTGCCCTTCCTCATCA
AAAGGCTACCTATCTGCAAATCCAATGTTCTTTCCCACTCCTACTGCCTGCACCCAGACATGATGAAGCT
TGCCTGTGCTGACATCACCATCAACAGTATTTATGGACTCTTTGTTCTTGTGTCTACCTTTGGCATGGAC
CTGCTTTTTATTTTCCTCTCCTATGTGCTCATTCTGCGTTCTGTTATGGCCATTGCTTCTCATGAGGAAC
GCCTTAAAGCTCTCAACACATGTGTATCACATATCTTGGCTGTGCTTGCATTTTATGTGCCAATGATAGG
GGTCTCTACAGTTCACCGTTTTGGGAAGCATGCCCCACGATACATACATGTCCTCATGTCCAATGTCTAC
CTCTTTGTGCCTCCTGTTCTCAACCCTCTCATTTACAGTGCCAAGACAAAGGAGATCCGCCGTGCCATAT
TCCGCATGTTTCGCCGTATCAAACTGTGA

Translation (312 aa):
MALFNVTHPASFLLTGIPGLESLHPWLAGPLCVMYAVALGANTVILQAVRVEPILHAPMYYFLSMLSFSD
VAMSMATLPTVLRTFCFDARSIAFDACLVQMFLIHSFSMMESGILLAMSFDRYVAICNPLHYATVLTNEF
IAGMGLAVTARSFITLFPLPFLIKRLPICKSNVLSHSYCLHPDMMKLACADITINSIYGLFVLVSTFGMD
LLFIFLSYVLILRSVMAIASHEERLKALNTCVSHILAVLAFYVPMIGVSTVHRFGKHAPRYIHVLMSNVY
LFVPPVLNPLIYSAKTKEIRRAIFRMFRRIKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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