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Report for CCDS21553.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21553.1 Public Mus musculus 7 Or51h5 23 108 98 CCDS HistoryNCBI Gene:259093Re-query CCDS DB by CCDS ID:21553.1Re-query CCDS DB by GeneID:259093See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21553.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098214.1 ENSMUSP00000095816.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098214.1Link to Ensembl Protein Viewer:ENSMUSP00000095816.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000098214Re-query CCDS DB by Protein ID:ENSMUSP00000095816
Original member Current member EBI ENSMUST00000215782.2 ENSMUSP00000149174.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000215782.2Link to Ensembl Protein Viewer:ENSMUSP00000149174.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000215782Re-query CCDS DB by Protein ID:ENSMUSP00000149174
Original member Current member EBI ENSMUST00000214096.1 ENSMUSP00000150579.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000214096.1Link to Ensembl Protein Viewer:ENSMUSP00000150579.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000214096Re-query CCDS DB by Protein ID:ENSMUSP00000150579
Original member Current member NCBI NM_147089.2 NP_667300.1 Accepted alive Link to Nucleotide Sequence:NM_147089.2Link to Protein Sequence:NP_667300.1Re-query CCDS DB by Nucleotide ID:NM_147089Re-query CCDS DB by Protein ID:NP_667300Link to BLAST:NP_667300.1

Chromosomal Locations for CCDS 21553.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 102927630 102928586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (957 nt):
ATGGCAGATCATAACCACTCTCAGTCCCAGCATCTGTACTTTATCTTAACTGGAATCCCTGGACTTGAGC
AGAAGTATTACTGGATGGCATTCCCATTGGGCGCTATATATGTCATTGCACTCTTTGGAAATGGTGTCAT
CATCTCTACAATCAAGTCTGAATCTTCTCTGCATATTCCCATGTACTACTTTCTGTGTATGCTAGCATTT
GCAGATATGGGGCTCACCCTTTGTACTCTACCATCTATGCTAGGCATATTCTGGTTTAATTACAAATTCA
TTACTTTTGATGGTTGTCTTGTTCAGATGTACTTCATTCACACCTTCTCAGCCATTGAGTCAGGAGTGCT
AGTTGCAATGGCCATTGATCGGGTCATAGCAATCTGGAGCCCTCTTAGATATGGCACCATTTTAACCAAT
GGTGTGGTCTGTAAAATAGGGATGCTCATCTTGTCAAGAGCAGTCTGTGTGGTTTTCCCTGTGCCTTTTC
TCATCAAGAGGCTCCCTTTTTATCGCTCCAACATCCTCTCCCACTCCTTCTGCCTCCATCAAGATGTCAT
GCGCCTTGCCTGTGCCAGCACCCGTGTCAACAGTCTCTATGGCCTTATAGCTGTCATCTTTACCAAGGGT
TCTGATTCCCTTTCTATCCTCATCTCCTATGTGTTCATACTTCGCACGGTGATGGCTATTGCCTCTGGGG
AGGGCCGGCTGAAGGCTCTCAACACCTGTGTGTCCCACATCTGTGCTGTACTTATCTTCTATGTGCCATT
GATTGGGGTGTCAGTCATTCATCGCTTTGGAAAGCACCTGTCGCCACTGACTCATGCCCTCATGGCAAAT
GCTTATCTTCTTGTCCCCCCTGTGCTAAACCCCATAGTTTATACTGTGAAGACCAAGGAAATAAGAAAAA
AGATTATCCAGATATTTATTCGAACCAAGATTACAACAGAGGGTTAA

Translation (318 aa):
MADHNHSQSQHLYFILTGIPGLEQKYYWMAFPLGAIYVIALFGNGVIISTIKSESSLHIPMYYFLCMLAF
ADMGLTLCTLPSMLGIFWFNYKFITFDGCLVQMYFIHTFSAIESGVLVAMAIDRVIAIWSPLRYGTILTN
GVVCKIGMLILSRAVCVVFPVPFLIKRLPFYRSNILSHSFCLHQDVMRLACASTRVNSLYGLIAVIFTKG
SDSLSILISYVFILRTVMAIASGEGRLKALNTCVSHICAVLIFYVPLIGVSVIHRFGKHLSPLTHALMAN
AYLLVPPVLNPIVYTVKTKEIRKKIIQIFIRTKITTEG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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