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Report for CCDS11141.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11141.1 Public Homo sapiens 17 KRBA2 24 110 108 CCDS HistoryNCBI Gene:124751Re-query CCDS DB by CCDS ID:11141.1Re-query CCDS DB by GeneID:124751See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11141.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000643221.1 ENSP00000494883.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000643221.1Link to Ensembl Protein Viewer:ENSP00000494883.1Re-query CCDS DB by Nucleotide ID:ENST00000643221Re-query CCDS DB by Protein ID:ENSP00000494883
Original member Current member NCBI NM_213597.3 NP_998762.1 Accepted alive Link to Nucleotide Sequence:NM_213597.3Link to Protein Sequence:NP_998762.1Re-query CCDS DB by Nucleotide ID:NM_213597Re-query CCDS DB by Protein ID:NP_998762Link to BLAST:NP_998762.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_998762.1 492 Q6ZNG9 492 100% 0 0

Chromosomal Locations for CCDS 11141.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 8369134 8370386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 8371309 8371534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1479 nt):
ATGCCTTCATTCCTGGTGCCCTCTCTTGTCTCTTCCCCAGTCCTGCTGAAGCTGCTCTTTAGCCCAGGCC
CC
AAGACTATATGGTCCCTGTGGCAGCAGCCAATGTTGTTTCAGGAAGCAACAGCATTTGAAAATATGAC
C
AAAGATTGGAATTATTTAGAAGGCTCTCAAAAGGATTGCTACAGAGACACAATGCTGGACAGTTATGAG
AAC
ACGGTCCCACAGGGATCCTTCTTACAGCTCTCCATGATGCCTCAGAGAGCTGGAAATGATCCACCTG
GG
GTTTCAAATGCAAGTGAAATGGAAATGGAGATAAGTAACATGAGAGAAAAGTTTCTTATGAGTGTAAC
A
AAGTTAGTAGAAAGCAAAAGTTACAACAGCAAGGTATTTTCCAAAGAAAAGTACTTTCAAACAATAAAG
GAA
GTTAAAGAAGCTAAAGAAAAAGGGAAGAAGTCATCACGTGATTATCGCCGTGCAGCAAAATATGATG
TG
ATCTCTGTACAGGGCACAGAGAAACTGATAGAGGCTACTCATGGAGAACGTGATCGAATACGGTATTA
T
GTACATAAGGAAGAGTTGTTTGATATTCTTCATGATACACATCTCAGTATTGGACATGGTGGGCGGACA
CGC
ATGCTCAAGGAGCTGCAAGGAAAATATGGGAATGTCACCAAAGAAGTTATTGTCTTATATCTGACTC
TG
TGTAAACAGTGCCACCAGAAGAACCCAGTACCCAAGAGAGGCCTTGCACCAAAGCCCATGACTTTTAA
G
GACATAGACTCCACATGCCAAGTTGAAATACTTGACATGCAGTCCAGTGCCGATGGTGAGTTCAAGTTC
ATT
TTATACTACCAGGATCACTCAACCAAGTTTATTATTTTACGGCCATTAAGAACCAAACAGGCCCATG
AG
GTGGTCAGTGTCTTGTTAGATATTTTCACAATTCTTGGTACACCCAGTGTGTTAGACTCTGACAGTGG
C
GTTGAGTTCACAAACCAGGTTGTTCATGAGCTCAATGAGTTGTGGCCAGACCTAAAGATTGTATCTGGT
AAG
TACCACCCTGGCCAAAGCCAGGGCTCCCTGGAAGGAGCAAGCCGTGATGTAAAGAACATGATAAGTA
CC
TGGATGCAGAGTAACCACTCATGTCACTGGGCCAAAGGCCTCCGATTCATGCAGATGGTGAGGAATCA
G
GCTTTCGACGTTTCCTTGCAGCAAAGTCCATTTGAGGCAATGTTTGGCTATAAAGCCAAATTTGGGCTA
TAT
TCCTCAAACTTGCCCCGGGAAACTGTGGCTACTTTACAAACGGAAGAAGAGCTAGAAATTGCTGAAG
AA
CAGCTAGAAAATAGCCTTTGGATCAGGCAGGAAGAAAGGGCTGAGATTGGAGCAGACAGATCTGATAT
G
GACGATGACATGGATCCCACTCCTGAAGCTTCAGAACCCAGCACCTCACAAGGGACTTCCGGTCTCCTC
TGC
TGGTGA


Translation (492 aa):
MPSFLVPSLVSSPVLLKLLFSPGPKTIWSLWQQPMLFQEATAFENMTKDWNYLEGSQKDCYRDTMLDSYE
N
TVPQ
GSFLQLSMMPQRAGNDPPGVSNASEMEMEISNMREKFLMSVTKLVESKSYNSKVFSKEKYFQTIK
E
VKEAKEKGKKSSRDYRRAAKYDVISVQGTEKLIEATHGERDRIRYYVHKEELFDILHDTHLSIGHGGRT
R
MLKELQGKYGNVTKEVIVLYLTLCKQCHQKNPVPKRGLAPKPMTFKDIDSTCQVEILDMQSSADGEFKF
I
LYYQDHSTKFIILRPLRTKQAHEVVSVLLDIFTILGTPSVLDSDSGVEFTNQVVHELNELWPDLKIVSG
K
YHPGQSQGSLEGASRDVKNMISTWMQSNHSCHWAKGLRFMQMVRNQAFDVSLQQSPFEAMFGYKAKFGL
Y
SSNLPRETVATLQTEEELEIAEEQLENSLWIRQEERAEIGADRSDMDDDMDPTPEASEPSTSQGTSGLL
C
W




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 Genome Browser Links:   Ensembl Genome Browser
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