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Report for CCDS10962.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10962.1 Public Homo sapiens 16 JPH3 24 110 108 CCDS HistoryNCBI Gene:57338Re-query CCDS DB by CCDS ID:10962.1Re-query CCDS DB by GeneID:57338See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10962.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000284262.3 ENSP00000284262.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000284262.3Link to Ensembl Protein Viewer:ENSP00000284262.2Re-query CCDS DB by Nucleotide ID:ENST00000284262Re-query CCDS DB by Protein ID:ENSP00000284262
Original member Current member NCBI NM_020655.4 NP_065706.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020655.4Link to Protein Sequence:NP_065706.2Re-query CCDS DB by Nucleotide ID:NM_020655Re-query CCDS DB by Protein ID:NP_065706Link to BLAST:NP_065706.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065706.2 748 Q8WXH2-1 748 100% 0 0

Chromosomal Locations for CCDS 10962.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 87603147 87603528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87644258 87645035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87684142 87684266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87689646 87690526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87696580 87696660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2247 nt):
ATGTCCAGTGGGGGCAGGTTTAATTTTGACGACGGAGGGTCCTACTGTGGAGGCTGGGAGGACGGCAAGG
CGCACGGCCATGGCGTCTGCACCGGCCCCAAGGGCCAAGGCGAATACACCGGCTCGTGGAGCCACGGCTT
CGAGGTGCTGGGCGTCTACACCTGGCCCAGCGGCAACACGTACCAGGGCACCTGGGCGCAGGGCAAGCGC
CACGGCATCGGCCTGGAGAGCAAGGGGAAGTGGGTGTACAAGGGCGAGTGGACGCACGGATTCAAGGGGC
GCTACGGGGTGCGGGAGTGCGCGGGCAACGGGGCCAAATACGAAGGGACCTGGAGCAACGGGCTGCAGGA
CGGCTACGGGACCGAGACCTACTCGGACGGAGGGACCTACCAGGGCCAGTGGGTCGGTGGCATGCGCCAG
GGCTACGGCGTCCGGCAGAGCGTCCCGTATGGCATGGCCGCGGTCATCCGCTCACCCCTGAGGACGTCCA
TCAACTCCCTGCGCAGCGAGCACACCAACGGCACGGCGCTGCATCCCGACGCCTCTCCGGCGGTGGCCGG
CAGCCCGGCCGTGTCCCGCGGGGGCTTCGTGCTCGTGGCCCACAGTGACTCCGAGATCCTCAAGAGCAAG
AAGAAGGGGCTGTTTCGGCGCTCGCTGCTGAGTGGGCTGAAGCTGCGCAAGTCGGAGTCCAAGAGCAGCC
TGGCCAGCCAACGCAGCAAGCAGAGCTCCTTTCGCAGCGAGGCGGGCATGAGCACCGTCAGCTCCACGGC
CAGCGACATCCACTCCACCATCAGCCTGGGCGAGGCTGAGGCCGAGCTGGCGGTCATCGAGGACGACATC
GACGCCACCACCACCGAGACCTACGTGGGCGAGTGGAAGAACGACAAACGCTCCGGCTTCGGCGTGAGCC
AGCGCTCGGACGGGCTCAAGTACGAGGGCGAGTGGGCCAGCAACCGGCGCCATGGCTACGGCTGCATGAC
CTTCCCGGACGGCACCAAGGAGGAGGGCAAGTACAAGCAGAACATCCTCGTCGGCGGCAAGCGCAAGAAC
CTCATCCCCCTGCGGGCCAGCAAGATCCGCGAGAAGGTGGACCGCGCCGTTGAGGCCGCTGAGCGGGCCG
CCACCATCGCCAAGCAGAAGGCTGAGATCGCGGCTTCCAGGACCTCCCACTCTCGGGCAAAGGCCGAGGC
AGCCCTCACAGCAGCTCAGAAAGCCCAGGAGGAGGCGCGGATCGCCAGGATCACTGCCAAAGAGTTCTCC
CCTTCCTTCCAGCACCGGGAAAACGGGCTGGAGTACCAGAGGCCGAAGCGTCAGACCTCCTGTGACGACA
TCGAGGTGCTGTCCACCGGGACACCCCTGCAGCAGGAGAGCCCCGAGCTGTACCGCAAGGGCACCACTCC
CTCCGACCTGACCCCCGACGACAGCCCCCTGCAGAGCTTCCCCACCAGCCCCGCGGCCACCCCGCCGCCC
GCGCCCGCCGCCAGGAACAAGGTCGCCCACTTCTCGAGGCAGGTGTCGGTGGACGAGGAGCGGGGCGGGG
ACATCCAGATGCTCCTGGAGGGCCGGGCCGGGGACTGCGCCCGCAGCAGCTGGGGCGAGGAGCAGGCCGG
GGGCTCCAGGGGTGTCCGCAGCGGTGCCCTGCGCGGCGGCCTGCTCGTGGATGACTTCCGCACCCGAGGT
TCGGGCCGCAAGCAGCCCGGGAACCCCAAGCCGCGGGAGCGGCGGACGGAGTCACCCCCCGTGTTCACGT
GGACTTCCCACCACCGGGCCAGCAACCACAGCCCCGGAGGCTCCAGGCTGCTGGAGCTGCAGGAGGAGAA
GCTGAGCAACTACCGGATGGAGATGAAACCCTTGCTGAGGATGGAGACGCATCCCCAGAAAAGACGCTAC
AGCAAGGGCGGCGCCTGCCGGGGCTTGGGGGACGACCACCGCCCCGAGGACCGGGGCTTCGGGGTGCAGA
GACTGCGGTCCAAGGCCCAGAACAAGGAGAACTTCAGGCCGGCCTCCTCCGCGGAGCCCGCCGTGCAGAA
ACTGGCGAGCCTGCGGCTGGGCGGGGCCGAGCCCCGGTTGCTGCGTTGGGACTTGACCTTCTCCCCGCCC
CAGAAATCCTTGCCTGTCGCTCTAGAGTCCGACGAGGAGAATGGGGATGAGCTCAAGTCCAGTACGGGCT
CAGCGCCTATCCTGGTGGTCATGGTGATCTTGCTCAACATCGGAGTCGCCATTCTGTTTATTAACTTTTT
CATCTGA

Translation (748 aa):
MSSGGRFNFDDGGSYCGGWEDGKAHGHGVCTGPKGQGEYTGSWSHGFEVLGVYTWPSGNTYQGTWAQGKR
HGIGLESKGKWVYKGEWTHGFKGRYGVRECAGNGAKYEGTWSNGLQDGYGTETYSDGGTYQGQWVGGMRQ
GYGVRQSVPYGMAAVIRSPLRTSINSLRSEHTNGTALHPDASPAVAGSPAVSRGGFVLVAHSDSEILKSK
KKGLFRRSLLSGLKLRKSESKSSLASQRSKQSSFRSEAGMSTVSSTASDIHSTISLGEAEAELAVIEDDI
DATTTETYVGEWKNDKRSGFGVSQRSDGLKYEGEWASNRRHGYGCMTFPDGTKEEGKYKQNILVGGKRKN
LIPLRASKIREKVDRAVEAAERAATIAKQKAEIAASRTSHSRAKAEAALTAAQKAQEEARIARITAKEFS
PSFQHRENGLEYQRPKRQTSCDDIEVLSTGTPLQQESPELYRKGTTPSDLTPDDSPLQSFPTSPAATPPP
APAARNKVAHFSRQVSVDEERGGDIQMLLEGRAGDCARSSWGEEQAGGSRGVRSGALRGGLLVDDFRTRG
SGRKQPGNPKPRERRTESPPVFTWTSHHRASNHSPGGSRLLELQEEKLSNYRMEMKPLLRMETHPQKRRY
SKGGACRGLGDDHRPEDRGFGVQRLRSKAQNKENFRPASSAEPAVQKLASLRLGGAEPRLLRWDLTFSPP
QKSLPVALESDEENGDELKSSTGSAPILVVMVILLNIGVAILFINFFI


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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