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Report for CCDS36444.1 (previous version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36444.1 Public Mus musculus 12 Akap6 10 38.1 68 CCDS HistoryNCBI Gene:238161Re-query CCDS DB by CCDS ID:36444.1Re-query CCDS DB by GeneID:238161

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Sequence IDs included in CCDS 36444.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member EBI ENSMUST00000095737 ENSMUSP00000093406 Accepted not alive Link to Ensembl Transcript Viewer:ENSMUST00000095737Link to Ensembl Protein Viewer:ENSMUSP00000093406Re-query CCDS DB by Nucleotide ID:ENSMUST00000095737Re-query CCDS DB by Protein ID:ENSMUSP00000093406
Original member Current member NCBI NM_198111.2 NP_932779.2 Accepted alive Link to Nucleotide Sequence:NM_198111.2Link to Protein Sequence:NP_932779.2Re-query CCDS DB by Nucleotide ID:NM_198111Re-query CCDS DB by Protein ID:NP_932779Link to BLAST:NP_932779.2

Chromosomal Locations for CCDS 36444.1

Assembly GRCm38 (GCF_000001635.20)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

Chromosome Start Stop Links
12 52795871 52796200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52880639 52880890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52886309 52888063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52911801 52911923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52937135 52937231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52938343 52938506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53010474 53010622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53025721 53025841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53069107 53069253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53072290 53072511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53104515 53104730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53139381 53142728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (6924 nt):
ATGTTAACCATGAGTGTGACCCTTTCCCCACTGCGGTCCCAGGACCCAGACCCCATGGCGACTGATGCCT
CGCCCATGGCCATCAACATGACACCTACCGTGGAGCAGGAGGAAGGAGAGGGAGAAGAGGCCGTGAAGGA
CGTGGGTGCTGAGCAGCAGTATGGAAAGCCACCTCCACTCCACACAGCAGCCGACTGGAAGATTGTCCTG
CACTTACCTGAGATTGAGACCTGGCTCCGGATGACCTCAGAGAGGGTCCGTGACCTAACCTACTCGGTCC
AGCAGGATGCAGACAGCAAGCATGTGGATGTGCATCTAGTTCAGCTAAAGGATATTTGCGAGGATATTTC
CGACCACGTGGAGCAGATCCATGCCCTCCTTGAGACGGAGTTCTCCCTGAAGCTGCTGTCCTACTCGGTC
AATGTCATCGTAGACATCCACGCAGTGCAGCTGCTCTGGCACCAGCTCCGCGTATCCGTGCTGGTCCTCC
GGGAGCGCATCCTACAAGGTCTGCAGGACGCCAATGGCAACTACACCAGGCAGACTGACATTCTGCAAGC
ATTCTCTGAAGAAACAACAGAGGGCCGGCTTGACTCCCTCACAGAAGTGGACGACTCTGGGCAGTTAACT
ATCAAATGCTCTCAGAATTATTTGTCTCTGGATTGTGGTATTACTGCCTTTGAACTTTCTGACTACAGTC
CAAGTGAGGATCTGCTTGGTGGCCTGGGCGACATGACCACTAGCCAGGCCAAAACTAAATCGTTTGACTC
TTGGAGTTACAGCGAGATGGAAAAGGAATTTCCCGAGCTCATCCGAAGCGTTGGGCTGCTTACAGTGGCC
ACTGAGCCTGTCCCTTCCAGCTGTGGAGCAGCCAATGAGGACTCATCTCAAGTGATCCTTTCAGAGGACC
ACAGAGGTGGACATGAGGAAGATGGCGCTCTTGAACCTGGAGAGCAGCTGGGCTCAACACTGGAGACGTC
TTCCTTAGGGGACACACTGACAAACGCTGCTGAACACCCTCCGGAGACAGCAAACCAAGACTCTACTTCC
TCTCCGCAGCTTGGTGCGAAAAAATCCCAGCCTGGTCCTTGTGAAATGATGACTCCCAAGAGATCCATCC
GCGATTGCTTTAATTATAACGAGGACTCTCCCACGCAGCCCACATTGCCCAAAAGAGGGCTATTTCTAAA
AGAAACTCTTAAGAACGAGCGGAGAGGCAGTGATGGGAAGGGGAGGGTGGTTGACCTGAAGCCTGAGCTG
AGCAGAAGCACCCCGTCCCTGGTGGAACCCCCTGACAGATCGAAGCTCTGCCTAGTGTTGCAGTCTTCCT
ACCCCAGCAGCCCTTCTGCCGCCAGCCAGTCCTATGAGTGTTTGCACAAGGTGGGGATCGGCAATCTTGA
AAACATAGTCAGAAGTCACATTAAAGAAATTTCTTCCAGTTTGGGAAGGCTTACTGACTGCCATAAAGAG
AAACCGCGACTGAAAAAGCCTCACAAGACCTTGGCCGAGGTGTCCCTGTGCAAAATACCTAAACGGGGAA
CTGGTTCAGGAAAGCAATCCGAGAATACCAGGAGCTCAGTCGTGCCGACCATGGTGTCTCCTGGAGCTCC
GAAAGCCACGGCGAGACCAGCAACAGATTCTGCGTCTACAACCTCAGGTGACACGTGCCATCAGAGAAAT
CGGGGTGGAAAATTGCCAGCGCAGTCGAAGGCCTCCAGCTCATCCCCTTGTAGTCACAGCAGTGAGTCCT
CTCTTGGCTCAGACAACATCAAATCCCCACTTCCTCTCCTTTCAAAAAGCCAAAAAGGCTCCCCACCCGC
TCCATGTCACGCCACACAGAACGGTCAGGTGGTGGAGGCCTGGTACGGCTCTGATGAATACCTAGCGCTG
CCATCTCACCTCAAACAAACGGAGGTGTTAGCTCTGAAACTGGAGAACCTAACCAAGCTTCTACCCCAGA
AACCCAGAGGAGAGACTATCCAGGATATTGATGACTGGGAACTGTCTGAGATGAATTCAGACTCTGAAAT
CTATCCAACGTACCATATCAAGAAAAAACACACAAGGCTAGGCACCGTCTCTCCGAGCTCATCCAGCGAC
ATAGCCTCATCTCTCGGGGAGAGCATTGAATCTGGGCCCCTGAGTGACATTCTTTCTGATGAGGACTTAT
GTATGCCCCTCTCCGGCATGAAAAAGTTCACTGATGAGAAATCAGAGAGACCTTCATCCTCTGAGAAGAA
TGAGAGCCATTCTGCTACAAAATCAGCCTTAATTCAGAAACTAATGAAAGATATTCAGCACCAAGATAAC
TATGAAGCCATCTGGGAAAGAATTGAGGGGTTTGTGAACAAGCTGGACGAATTCATTCAGTGGCTAAACG
AAGCCATGGAGACCACGGAGAACTGGACTCCGCCTAAAGCCGAGACCGACAGCCTCCGGCTGTACCTGGA
GACACACTTGAGCTTTAAGTTGAACGTAGACAGTCACTGTGCCCTCAAGGAAGCCGTGGAGGAAGAAGGA
CACCAACTTCTTGAGCTCATTGCGTCTCACAAAGCAGGACTGAAGGACATGCTGAAGATGATTGCAAGTC
AATGGAAGGAGCTGCAGAGGCAAATCAAACGGCAACACAGCTGGATTCTCAGAGCCCTGGACACCATCAA
AGCCGAGATACTGGCTACTGATGTGTCTGTGGAGGACGAGGAGGGGACGGGGAGCCCCAAGGCTGAGGCT
CAGCTCTGCTACCTGGAAGCTCAGAGAGACGCTGTGGAGCAGATGTCCCTCAAGCTGTACAGCGAGCAGT
ATACCAGTGGTAGCAAGAGGAAAGAAGAGTTTGCCGACATGTCGAAAGCGCATTCGGTGGGAAGCAATGG
GCTTCTGGACTTTGATTCAGAATATCAGGAGCTCTGGGATTGGCTGATTGACATGGAGTCCCTTGTGATG
GACAGCCACGACCTGATGATGTCAGAGGAGCAGCAGCAGCATCTTTACAAGCGCTACAGCGTGGAAATGT
CCATCAGGCACCTGAAAAAGACAGAGCTACTTAGCAAGGTTGAAGCTTTGAAGAAAGGTGGCCTTTCACT
ACCAAATGATATCCTGGAAAAAGTGGATTCAATTAATGAAAAATGGGAGCTGCTTGGGAAAACCCTAAGA
GAGAAGATACAGGACACAATGGCAGGCCACAGTGGGTCGGGCCCACGTGACCTGCTCTCTCCTGAAAGCG
GAAGCCTGGTAAGGCAGCTGGAGGTCAGGATCAAAGAGCTGAAAAGGTGGCTAAGAGATACAGAGCTTTT
CATCTTCAATTCCTGTCTGAGACAAGAGAAGGAAGGAACGAGCGCCGAGAAACAACTCCAATACTTTAAG
TCGCTCTGTCATGAGATCAAGCAGCGGCGTAGAGGAGTGGCCTCCATTCTGAGGTTGTGCCAGCACCTTC
TGGATGACCGGGACACTTGTAATCTGAACGCAGATCACCAGCCCATGCAGCTGATCATTGTAAACCTTGA
AAGAAGGTGGGAAGCCATCGTCATGCAAGCTGTCCAGTGGCAAACACGGTTACGAAAGAAGATGGGAAAA
GAATCTGAGACTCTGAATGTGATTGACCCTGGCTTGATGGACCTGAATGGAATGAGTGAGGATGCCCTGG
AATGGGATGAGACAGACATAAGTAACAAACTCATTAGTGTGCATGAAGAATCCAACGACCTTGATCAAGA
CCTGGAGCCTATGGTCCCAACAGTGAAACTTGAAGAGACACACCACAAGGACTCCGGTTATGAAGAGGAG
GCAGGTGACTGTGGAGGGTCCCAGTATACCTCAAATATCACTGCCCCTTCCAGCCCACACATTTACCAAG
TGTACAGTCTCCACAATGTTGAGTTCCACGAGGACAGCCACACTCAGTTTCTAAAAAGCAGCCCCAAGTT
CACAGGCACAGTGCAGCCCACTGTTTTAACTAAGAGCCTCAGTAAAGATTCTTCATTTTCATCCACAAAA
TCGTTACCAGACCTTTTAGGGGGTTCCAGCTTGGTGAGGCCTTACTCGTGTCAGAGTGGAGACTTGAGCC
AGAATTCAGGCAGTGAGAGTGGAATTGTCAGCGAAGGAGACAATGAGATGCCAACCAACTCCGACATGAG
CTTGTTCAGTATGGTCGATGGGTCCCCGAGTAACCCTGAAACACAACATCTGGACCCACAAATGGGAGAC
GCAGCCAATGTGCTGGAGCAAAAATTTAAAGATGAGGGGGAGTGCATTAAGCTTTCAAGTGTCTCTCAGG
CATCTGTCTCACCAGTGGGTTGTGTAAATGGGAAAGCTGGGGACTTAAACAGTATTACCAAACACACCAC
TGATTGTTTGGGAGACGAATTACAAGGAAAACATGAGGTGTTTACATTTTATGACTACTCGTACCTCCAA
GGCTCAAAACTCAAATTCCCAATGATAATGAAACAGCCGCAGAGTGAGAAGGCACATTTGGAGGATCCCC
TTCTTCGTGGTTTCTATTTTGATAAAAAGTCCTGCAAACCTAAACATCAGACTTCTGAGTCACAACCAGA
CGCGCCCCTCCATGAAAAGATCTTGGCAAGTGCCCCCCACGAGATGGGTCGAAGCTCATACAAAAGTAGC
GACATAGAGAAGGCACTCACGGGCATCCAGAATGCCCGACAGCTCTCCCTTTTATCTCGTAGCTCATCTG
TAGAGTCCCTTTCCCCAGGGGGTGATTTGTTTGGATTGGGAATCTTTAAAAATGGCAGTGACAGCCTCCA
GCGAAGCACTTCTTTAGAAAGTTGGTTGACATCCTATAAGAGCAACGAGGATCTTTTTAGCTGTCACAGC
TCTGGGGACATAAGTGTGAGCAGTGGCTCGGTTGGTGAGCTGAGCAAGAGGACATTAGATCTTTTGAATC
GTCTGGAGAACATACAGAGCCCCTCAGAGCAAAAGATCAAGCGGAGTGTTTCAGATATCACTCTGCAAAG
CAGTTCCCAAAAGATGTCCTTCAGTGGCCAGATGTCACTGGATGTCGCATCCTCTATCAATGAAGACTCG
CCGGCATCTCTTACCGAACTGAGTAGCAGCGATGAGCTCTCTCTTTGCTCGGAGGACATTGTGTTACACA
AAAACAAGGTCCCAGAGTCCAACGCATCATTCAGGAAGCGCCTGAATCGCTCGGTGGCTGATGAGAGCGA
CGTCAATGTCAGCATGATTGTCAACGTCTCCTGCACCTCTGCTTGCACTGATGACGAAGACGACAGCGAC
CTCCTCTCCAGCTCCACTCTCACCTTGACGGAAGAAGAGCTGTGTCTCAAAGATGAGGATGACGACTCCA
GTATCGCAACGGATGATGAAATTTATGAGGAAAGCAACCTGATGTCTGGGCTGGACTACATCAAGAACGA
ACTGCAGACGTGGATAAGACCCAAACTTTCCTTGTCGAGAGAAAAGAAACGGCCCAGTGTCACTGATGAA
ATAAAGGTCAATAAAGATGGAGGAAGTACCGAGAGGGCCAATCCCTCGGACACCCTGGACATTGAGGCCC
TTCTAAATTGCTCCATAAAACGTCTCTCTGAAAACAATGGGAATGGCAAGAACCCACCCAGAACTCATGA
CTTAGGAACCAAAGGTGAAAATAAGAAAAATACGTACGACGTTACTAAAGATCCACATGTGGCCGACATG
GAAAATGGCAATGTTGAAAGTACTCCAGAGAGAGAAAAGGAGAAGCCAGAGATCCCAGAGGCATCAGCGA
ACCTTGCTTCAAATGTGAAAAAGATTTCTGAATCCAAGCACGACGAGTATGAAGCATTAATGGATGGTTC
TGATGATTCAAGTGTCACTGGGAAGGAATTTGGTCCCCCAAATGATAGGCATCCTCCACAGATTGGTGCC
GATCCCCAGCATCCTGAAAGGGGTGACTGCACATCAGTCCAGAACTCTTGCTCAGGACTACTGTTGGAAA
CCGGTGGCGGAAGCAGACAAGATAGTGATGGACTCAAATCTTTGTCTAATGATGCACCAAGTGTGGCTAG
AAACGCTGCTGGTTGCTGCCTACTCGAACAAAATGAGACAGAGGAAAGTGCTTCTATCAGCAGCAGCACT
TCCTGTTGCAACTGCAAGCCAGATGTTTTCCATCAGAAAGATGATGAAGATTGTTCGGTACATGACTTTG
TTAAGGAAATCATTGACATGGCATCAACAGCCCTCAAAAGTAAATCACAACCTGAGAGTGAGGTGGCCGC
TCCCACGTCACTGACCCAAATTAAGGAGAAAGTGTTAGAGCATTCGCATCGGCCCATACACCTGAGGAAG
GGAGATTTTTACTCCTACCTATCTCTTTCGTCCCATGACAGTGACTGTGGGGAGGTCACCAATTACATAG
ATGAGAAGAGCAACACCCCATTGCCACCAGACACCGTGGACTCTGGCTTAGATGACAAGGAAGACGTGGA
CTGCTTCTTTGAAGCTTGTGTTGAGGACGAGCCTGCTGATGAGGAAGCCCGTCTCTCCAGTGCCCTTCCA
AATGAATCAGAAGTCCAGGATGAAGCTGCTAAGCCAGAACAAATGACAGCCAGCTCTTCTGTGTTCCGTG
ATGAGACAGACACGGTGCCTCTTTCAGGACTTTCCCCTCAGAAGGGAGCTGATGATGCAAAGGAAGGAGA
TGGTGCGTCCCACACTTCCCAGGGCTGTGTGGAGAGCGCAGAGCCTACCACCCCCCCAGGAAAGGCCAAG
AGAGAGGGGAGTTCAAGAAAGCAAAGTGTATCAGGAACGCCAGAAGAAAACGCTGCTTCAGCCAAACCGA
AAATTCAAGCTTTCTCTTTGAATGCAAAACAGCCAAAAGGCAAGGCTGCACTGTATCCCAGCCCCCAAAC
TTTAACCTGCAAAGAGAAGCTCGTAAGCTTTCATGAAGATCGACATAGTAACATGCATAGGTAG

Translation (2307 aa):
MLTMSVTLSPLRSQDPDPMATDASPMAINMTPTVEQEEGEGEEAVKDVGAEQQYGKPPPLHTAADWKIVL
HLPEIETWLRMTSERVRDLTYSVQQDADSKHVDVHLVQLKDICEDISDHVEQIHALLETEFSLKLLSYSV
NVIVDIHAVQLLWHQLRVSVLVLRERILQGLQDANGNYTRQTDILQAFSEETTEGRLDSLTEVDDSGQLT
IKCSQNYLSLDCGITAFELSDYSPSEDLLGGLGDMTTSQAKTKSFDSWSYSEMEKEFPELIRSVGLLTVA
TEPVPSSCGAANEDSSQVILSEDHRGGHEEDGALEPGEQLGSTLETSSLGDTLTNAAEHPPETANQDSTS
SPQLGAKKSQPGPCEMMTPKRSIRDCFNYNEDSPTQPTLPKRGLFLKETLKNERRGSDGKGRVVDLKPEL
SRSTPSLVEPPDRSKLCLVLQSSYPSSPSAASQSYECLHKVGIGNLENIVRSHIKEISSSLGRLTDCHKE
KPRLKKPHKTLAEVSLCKIPKRGTGSGKQSENTRSSVVPTMVSPGAPKATARPATDSASTTSGDTCHQRN
RGGKLPAQSKASSSSPCSHSSESSLGSDNIKSPLPLLSKSQKGSPPAPCHATQNGQVVEAWYGSDEYLAL
PSHLKQTEVLALKLENLTKLLPQKPRGETIQDIDDWELSEMNSDSEIYPTYHIKKKHTRLGTVSPSSSSD
IASSLGESIESGPLSDILSDEDLCMPLSGMKKFTDEKSERPSSSEKNESHSATKSALIQKLMKDIQHQDN
YEAIWERIEGFVNKLDEFIQWLNEAMETTENWTPPKAETDSLRLYLETHLSFKLNVDSHCALKEAVEEEG
HQLLELIASHKAGLKDMLKMIASQWKELQRQIKRQHSWILRALDTIKAEILATDVSVEDEEGTGSPKAEA
QLCYLEAQRDAVEQMSLKLYSEQYTSGSKRKEEFADMSKAHSVGSNGLLDFDSEYQELWDWLIDMESLVM
DSHDLMMSEEQQQHLYKRYSVEMSIRHLKKTELLSKVEALKKGGLSLPNDILEKVDSINEKWELLGKTLR
EKIQDTMAGHSGSGPRDLLSPESGSLVRQLEVRIKELKRWLRDTELFIFNSCLRQEKEGTSAEKQLQYFK
SLCHEIKQRRRGVASILRLCQHLLDDRDTCNLNADHQPMQLIIVNLERRWEAIVMQAVQWQTRLRKKMGK
ESETLNVIDPGLMDLNGMSEDALEWDETDISNKLISVHEESNDLDQDLEPMVPTVKLEETHHKDSGYEEE
AGDCGGSQYTSNITAPSSPHIYQVYSLHNVEFHEDSHTQFLKSSPKFTGTVQPTVLTKSLSKDSSFSSTK
SLPDLLGGSSLVRPYSCQSGDLSQNSGSESGIVSEGDNEMPTNSDMSLFSMVDGSPSNPETQHLDPQMGD
AANVLEQKFKDEGECIKLSSVSQASVSPVGCVNGKAGDLNSITKHTTDCLGDELQGKHEVFTFYDYSYLQ
GSKLKFPMIMKQPQSEKAHLEDPLLRGFYFDKKSCKPKHQTSESQPDAPLHEKILASAPHEMGRSSYKSS
DIEKALTGIQNARQLSLLSRSSSVESLSPGGDLFGLGIFKNGSDSLQRSTSLESWLTSYKSNEDLFSCHS
SGDISVSSGSVGELSKRTLDLLNRLENIQSPSEQKIKRSVSDITLQSSSQKMSFSGQMSLDVASSINEDS
PASLTELSSSDELSLCSEDIVLHKNKVPESNASFRKRLNRSVADESDVNVSMIVNVSCTSACTDDEDDSD
LLSSSTLTLTEEELCLKDEDDDSSIATDDEIYEESNLMSGLDYIKNELQTWIRPKLSLSREKKRPSVTDE
IKVNKDGGSTERANPSDTLDIEALLNCSIKRLSENNGNGKNPPRTHDLGTKGENKKNTYDVTKDPHVADM
ENGNVESTPEREKEKPEIPEASANLASNVKKISESKHDEYEALMDGSDDSSVTGKEFGPPNDRHPPQIGA
DPQHPERGDCTSVQNSCSGLLLETGGGSRQDSDGLKSLSNDAPSVARNAAGCCLLEQNETEESASISSST
SCCNCKPDVFHQKDDEDCSVHDFVKEIIDMASTALKSKSQPESEVAAPTSLTQIKEKVLEHSHRPIHLRK
GDFYSYLSLSSHDSDCGEVTNYIDEKSNTPLPPDTVDSGLDDKEDVDCFFEACVEDEPADEEARLSSALP
NESEVQDEAAKPEQMTASSSVFRDETDTVPLSGLSPQKGADDAKEGDGASHTSQGCVESAEPTTPPGKAK
REGSSRKQSVSGTPEENAASAKPKIQAFSLNAKQPKGKAALYPSPQTLTCKEKLVSFHEDRHSNMHR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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