Whole genome shotgun sequencing of FSIS21926533 by Illumina MiSeq - SRA

SRX7548603: Whole genome shotgun sequencing of FSIS21926533 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 1.5M spots, 424.1M bases, 249.3Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)

Study: GenomeTrakr Project: USDA - Food Safety and Inspection Service

PRJNA242847 • SRP040648 • All experiments • All runs

show Abstracthide Abstract

CDC isolated strains of Salmonella enterica

Sample:

SAMN13836471 • SRS5986123 • All experiments • All runs

Organism: Salmonella enterica subsp. enterica serovar Infantis

Library:

Name: FSIS21926533 Nextera XT shotgun library

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for FSIS21926533.

Spot descriptor:

1 forward151 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.54

Runs: 1 run, 1.5M spots, 424.1M bases, 249.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR10879511	1,454,460	424.1M	249.3Mb	2020-01-13

ID:: 9862676

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txid595[orgn] AND "strain FSIS21926533"[All Fields] (1)
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