Whole genome shotgun sequencing of FSIS21924061 by Illumina MiSeq - SRA

SRX5713724: Whole genome shotgun sequencing of FSIS21924061 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 1.8M spots, 524.4M bases, 309Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)

Study: GenomeTrakr Project: USDA - Food Safety and Inspection Service

PRJNA242847 • SRP040648 • All experiments • All runs

show Abstracthide Abstract

CDC isolated strains of Salmonella enterica

Sample:

SAMN11469259 • SRS4652322 • All experiments • All runs

Organism: Salmonella enterica subsp. enterica serovar Infantis

Library:

Name: FSIS21924061 Nextera XT shotgun library

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for FSIS21924061.

Spot descriptor:

1 forward151 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.54

Runs: 1 run, 1.8M spots, 524.4M bases, 309Mb

Run	# of Spots	# of Bases	Size	Published
SRR8933065	1,756,208	524.4M	309Mb	2019-04-20

ID:: 7695742

Supplemental Content

Related information

BioProject
Links to BioProject
BioSample
BioSample links
PMC
Full text articles in PMC
PubMed
Links to PubMed articles
Taxonomy
Links to Taxonomy
WGS
Links to nucleotide WGS masters

Search details

Recent activity

Clear Turn Off Turn On

txid595[orgn] AND "strain FSIS21924061"[All Fields] (1)
SRA

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity