Whole genome shotgun sequencing of FSIS1505309 by Illumina MiSeq - SRA

SRX1517261: Whole genome shotgun sequencing of FSIS1505309 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 1.9M spots, 530.5M bases, 308.8Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)

Study: GenomeTrakr Project: USDA - Food Safety and Inspection Service

PRJNA242847 • SRP040648 • All experiments • All runs

show Abstracthide Abstract

CDC isolated strains of Salmonella enterica

Sample:

SAMN04384232 • SRS1235872 • All experiments • All runs

Organism: Salmonella enterica subsp. enterica serovar Infantis

Library:

Name: FSIS1505309 Nextera XT shotgun library

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for FSIS1505309.

Spot descriptor:

1 forward151 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.54

Runs: 1 run, 1.9M spots, 530.5M bases, 308.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR3085537	1,925,643	530.5M	308.8Mb	2016-01-05

ID:: 2145839

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