Whole genome shotgun sequencing of FSIS11924888 by Illumina MiSeq - SRA

SRX6942179: Whole genome shotgun sequencing of FSIS11924888 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 1.3M spots, 380.7M bases, 216.9Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)

Study: GenomeTrakr Project: USDA - Food Safety and Inspection Service

PRJNA242847 • SRP040648 • All experiments • All runs

show Abstracthide Abstract

CDC isolated strains of Salmonella enterica

Sample:

SAMN12901237 • SRS5470371 • All experiments • All runs

Organism: Salmonella enterica subsp. enterica serovar Infantis

Library:

Name: FSIS11924888 Nextera XT shotgun library

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for FSIS11924888.

Spot descriptor:

1 forward151 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.54

Runs: 1 run, 1.3M spots, 380.7M bases, 216.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR10222576	1,290,092	380.7M	216.9Mb	2019-10-03

ID:: 9133831

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