Whole genome shotgun sequencing of FSIS11811681 by Illumina MiSeq - SRA

SRX4386087: Whole genome shotgun sequencing of FSIS11811681 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 1.9M spots, 564.2M bases, 322.6Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)

Study: GenomeTrakr Project: USDA - Food Safety and Inspection Service

PRJNA242847 • SRP040648 • All experiments • All runs

show Abstracthide Abstract

CDC isolated strains of Salmonella enterica

Sample:

SAMN09651417 • SRS3542364 • All experiments • All runs

Organism: Salmonella enterica subsp. enterica serovar Infantis

Library:

Name: FSIS11811681 Nextera XT shotgun library

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for FSIS11811681.

Spot descriptor:

1 forward151 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.54

Runs: 1 run, 1.9M spots, 564.2M bases, 322.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR7516023	1,893,305	564.2M	322.6Mb	2018-07-12

ID:: 5956251

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txid595[orgn] AND "strain FSIS11811681"[All Fields] (1)
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