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SRX9278468: GSM4827555: Total Spleen Bmem 3; Mus musculus; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 22.5M spots, 2.3G bases, 926.7Mb downloads

Submitted by: NCBI (GEO)
Study: Transcriptional and phenotypic profile of lung-resident memory B cells induced by influenza infection
show Abstracthide Abstract
Long-lived, tissue-resident memory B cells (BRM) are established in the lungs of mice after pulmonary influenza infection. Influenza-specific BRM were localised within inducible bronchus-associated lymphoid tissues (iBALT) and displayed phenotypic and transcriptional signatures reminiscent of tissue-resident T cells, distinct from classical memory B cells in the blood or secondary lymphoid sites. Overall design: Mice were infected intranasally with 50pfu of PR8 influenza virus. Memory (Bmem) or germinal centre (GC) B cells in lung, spleen, mediastinal lymph node and blood were bulk-sorted and transcriptional gene expression profiles generated by RNAseq. contributor: The Austin Liver Transplant Perfusionist Group
Sample: Total Spleen Bmem 3
SAMN16419289 • SRS7506577 • All experiments • All runs
Organism: Mus musculus
Library:
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: RNA was isolated from sorted cells using a QIAGEN RNeasy Plus Micro Kit, as per manufacturer's protocol. Illumina Truseq Stranded mRNA kit was use for library construction. RNA libraries were prepared for sequencing using standard Illumina protocols
Experiment attributes:
GEO Accession: GSM4827555
Links:
Runs: 1 run, 22.5M spots, 2.3G bases, 926.7Mb
Run# of Spots# of BasesSizePublished
SRR1280986622,525,9732.3G926.7Mb2021-11-21

ID:
12107003

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