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SRX884162: GSM1614848: 36h [350]; Mus musculus; RNA-Seq
1 ILLUMINA (Illumina HiSeq 1500) run: 29.9M spots, 4.7G bases, 3.1Gb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: The Calcium Channel Subunit Alpha2delta2 Suppresses Axon Regeneration in the Adult CNS
show Abstracthide Abstract
Purpose: Injuries to the adult central nervous system (CNS) often result in permanent disabilities because neurons lose the ability to regenerate their axon during development. Although the developmental transition from a growing to a transmitting phase may represent one of the first steps in the gradual loss of axon growth and regeneration ability, the molecular mechanisms regulating this process has yet to be identified. The main goal of this study was to dissect the molecular mechanisms mediating the decline in axon growth ability and its relationship with regeneration failure in the adult CNS. To this end, we sequenced the whole transcriptome of dorsal root ganglia (DRG) neurons in both growth competent and incompetent states at different developmental stages, in diverse culture and in vivo experimental conditions. Overall design: mRNA profiles of mouse embryonic E12.5 and E17.5 lumbar DRGs, conditioned and sham operated adult L4-5DRGs, and cultured adult lumbar DRG (6, 12, 24 and 36 hr after plating) neurons were generated by deep sequencing, in triplicate, using the Illumina TruSeq RNA Sample Prep Kits V2.
Sample: 36h [350]
SAMN03356820 • SRS851166 • All experiments • All runs
Organism: Mus musculus
Library:
Instrument: Illumina HiSeq 1500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Cells were isolated by cell sorting, lyzed in Qiazol and RNA isolated. Illumina TruSeq RNA Sample Prep Kits V2 was used with 10 ng of total RNA for the construction of sequencing libraries. RNA libraries were prepared for sequencing using standard Illumina protocols
Experiment attributes:
GEO Accession: GSM1614848
Links:
External link:
Runs: 1 run, 29.9M spots, 4.7G bases, 3.1Gb
Run# of Spots# of BasesSizePublished
SRR181160029,934,0114.7G3.1Gb2016-09-18

ID:
1267453

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