GSM1612027: YJG8: pS6-IP from 1% TMT stimulated olfactory epithelium;... - SRA

SRX879197: GSM1612027: YJG8: pS6-IP from 1% TMT stimulated olfactory epithelium; Mus musculus; RIP-Seq
1 ILLUMINA (Illumina HiSeq 2000) run: 38.1M spots, 1.9G bases, 1.1Gb downloads

Submitted by: NCBI (GEO)

Study: Molecular profiling of activated olfactory neurons identifies odorant receptors for odors in vivo

PRJNA255075 • SRP044258 • All experiments • All runs

show Abstracthide Abstract

We present a high-throughput in vivo method to identify odorant receptors responding to odorants, using phosphorylated ribosome immunoprecipitation of mRNA from olfactory epithelium of odor-stimulated mice followed by RNA-Seq. Overall design: pS6-IP RNA-Seq in odor stimulated vs control mice olfactory epithelium

Sample: YJG8: pS6-IP from 1% TMT stimulated olfactory epithelium

SAMN03351784 • SRS846781 • All experiments • All runs

Organism: Mus musculus

Library:

Instrument: Illumina HiSeq 2000

Strategy: RIP-Seq

Source: TRANSCRIPTOMIC

Selection: other

Layout: SINGLE

Construction protocol: homogenates of olfactory epithelium were incubated with pS6 antibody to immunoprecipitate mRNAs associated with pS6 mRNAs were reverse-transcribed into cDNA, which was then amplified and constructed into sequencing biraries using Illumina Nextera library prep kit.

Experiment attributes:

GEO Accession: GSM1612027

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 38.1M spots, 1.9G bases, 1.1Gb

Run	# of Spots	# of Bases	Size	Published
SRR1806275	38,107,651	1.9G	1.1Gb	2015-08-24

ID:: 1261161

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity