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SRX8571455: GSM4625106: Ox-LDL-pNaKtide-3; Mus musculus; RNA-Seq
1 ILLUMINA (Illumina HiSeq 1500) run: 13.2M spots, 1.3G bases, 554.3Mb downloads

Submitted by: NCBI (GEO)
Study: Expression profiling by RNA-Seq of 3T3 mouse pre-adipocyte cells after treatment with Indoxyl Sulphate or Oxidative LDL, with or without pNaKtide
PRJNA640220 • SRP267762 • All experiments • All runs
show Abstracthide Abstract
We performed expression profiling by RNA-Seq on 3T3 mouse pre-adipocyte cells. Cells were divided into six groups of five replicates each and were treated with either control (DMSO), Indoxyl Sulphate, or Oxidative LDL, either with or without pNaKtide (NaK). Overall design: RNA was extracted from cells in each group, and sequenced in a 2x50 base-pair design on an Illumina 1500 sequencer.
Sample: Ox-LDL-pNaKtide-3
SAMN15311032 • SRS6863475 • All experiments • All runs
Organism: Mus musculus
Library:
Instrument: Illumina HiSeq 1500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Total RNA was extracted from adipose tissue using RNeasy Protect Mini Kit (QIAGEN, Maryland) Libraries were prepared from 1 ug total RNA per sample using the Truseq strand mRNA kit (Illumina , San Diego, CA) according to the manufacturers' instructions.
Experiment attributes:
GEO Accession: GSM4625106
Links:
Runs: 1 run, 13.2M spots, 1.3G bases, 554.3Mb
Run# of Spots# of BasesSizePublished
SRR1204236913,204,9411.3G554.3Mb2020-06-20

ID:
11146200

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