GSM4475133: Female_LPS_1; Mus musculus; RNA-Seq - SRA

SRX8111470: GSM4475133: Female_LPS_1; Mus musculus; RNA-Seq
8 ILLUMINA (Illumina NovaSeq 6000) runs: 314.8M spots, 41.6G bases, 18.1Gb downloads

Submitted by: NCBI (GEO)

Study: Neuroinflammatory astrocyte subtypes in the mouse brain [scRNAseq]

PRJNA625201 • SRP256315 • All experiments • All runs

show Abstracthide Abstract

Single cell RNAseq of FACS-purified astrcoytes from saline- and LPS-injected Aldh1l1egfp mice at 24h and comparison male vs female Overall design: Astrocytes were FACS-purified from LPS- or saline-treated (24h) Aldh1l1egfp mice, run on the 10xChromium system and sequenced on NovaSeq6000. 3 saline female, 3 saline male, 3 LPS female, 3 LPS male animals

Sample: Female_LPS_1

SAMN14595086 • SRS6476544 • All experiments • All runs

Organism: Mus musculus

Library:

Instrument: Illumina NovaSeq 6000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Construction protocol: Single cells were run on the 10xChromium system Single cell libraries were generated using the 10xGenomic library kit

Experiment attributes:

GEO Accession: GSM4475133

Links:

NCBI link: NCBI Entrez (gds)

Runs: 8 runs, 314.8M spots, 41.6G bases, 18.1Gb

Run	# of Spots	# of Bases	Size	Published
SRR11541327	44,538,273	5.9G	2.6Gb	2021-03-01
SRR11541328	44,233,346	5.8G	2.5Gb	2021-03-01
SRR11541329	27,248,348	3.6G	1.6Gb	2021-03-01
SRR11541330	27,060,192	3.6G	1.6Gb	2021-03-01
SRR11541331	53,613,254	7.1G	3.1Gb	2021-03-01
SRR11541332	53,249,556	7G	3Gb	2021-03-01
SRR11541333	32,535,659	4.3G	1.9Gb	2021-03-01
SRR11541334	32,300,729	4.3G	1.9Gb	2021-03-01

ID:: 10561336

SRA

Sequence Read Archive

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