GSM3978655: Foxp3plus; Mus musculus; RNA-Seq - SRA

SRX6595734: GSM3978655: Foxp3plus; Mus musculus; RNA-Seq
2 ILLUMINA (Illumina NovaSeq 6000) runs: 111.6M spots, 14.1G bases, 4.4Gb downloads

Submitted by: NCBI (GEO)

Study: scRNAseq transcriptome analysis of developing regulatory T cells and precursors in the thymus

PRJNA556716 • SRP216429 • All experiments • All runs

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We analyzed the individual transcriptomes of thymic Treg cells (CD4+Foxp3+), their immediate precursors (CD25+CD4+Foxp3-) and mature CD4 single positive thymocytes (CD4+Foxp3-CD25-CD62L+CD24-). Overall design: To gain insight into characteristic features of thymocytes producing IL-2 in situ, single-cell RNA sequencing data was collected from mature CD25-Foxp3-CD4SP, CD25+Foxp3- and Foxp3+ CD4SP thymocytes.

Sample: Foxp3plus

SAMN12367437 • SRS5160794 • All experiments • All runs

Organism: Mus musculus

Library:

Instrument: Illumina NovaSeq 6000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Construction protocol: 10X Genomics protocols (Chromium Single Cell 3' Reagent Kits v2 Chemistry)

Experiment attributes:

GEO Accession: GSM3978655

Links:

NCBI link: NCBI Entrez (gds)

Runs: 2 runs, 111.6M spots, 14.1G bases, 4.4Gb

Run	# of Spots	# of Bases	Size	Published
SRR9840957	55,959,022	7.1G	2.2Gb	2019-08-20
SRR9840958	55,638,636	7G	2.2Gb	2019-08-20

ID:: 8701793

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