GSM3897905: RF124; Mus musculus; RNA-Seq - SRA

SRX6094148: GSM3897905: RF124; Mus musculus; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 55.6M spots, 2.8G bases, 1.6Gb downloads

Submitted by: NCBI (GEO)

Study: Identification of Rfx6-dependent genes in the adult mouse ileon by RNAseq

PRJNA549671 • SRP201876 • All experiments • All runs

show Abstracthide Abstract

The goal of this experiment was to identify Rfx6-regulated genes in the ileum of adult mice by comparative transcriptome studies, 8 days and 3 months after Rfx6 removal . Overall design: Rfx6f/f; Vilin-CreERT2 referred as Rfx6?AdIntmice were generated. Rfx6 was deleted by tamoxifen treatment. Ileum of mutant (Rfx6f/f; Vilin-CreERT2) and control mice (Rfx6f/+, or Rfx6f/f) were harvested 8 days and 3 months after tamoxifen treatment and RNA extracted.

Sample: RF124

SAMN12095380 • SRS4995129 • All experiments • All runs

Organism: Mus musculus

Library:

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Construction protocol: Ileon was harvested at 8 days and 3 months after tamoxifen gavage. Total RNA was extracred using TRI-reagent or RNeasy® Midi Kit (Qiagen). Library prep for total RNA-seq Ribozero/standard quantity

Experiment attributes:

GEO Accession: GSM3897905

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 55.6M spots, 2.8G bases, 1.6Gb

Run	# of Spots	# of Bases	Size	Published
SRR9327314	55,622,329	2.8G	1.6Gb	2019-08-15

ID:: 8148017

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity