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SRX5944720: GSM3840123: 71-HFD control; Mus musculus; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 28.9M spots, 3G bases, 853.3Mb downloads

Submitted by: NCBI (GEO)
Study: Removing a Double Bond from Ceramides Ameliorates Insulin Resistance and Hepatic Steatosis
show Abstracthide Abstract
Ceramides contribute to the lipotoxicity that underlies diabetes, hepatic steatosis, and heart disease. By genetically engineering mice, we deleted the enzyme dihydroceramide desaturase-1 (DES1) which inserts a conserved double bond into the backbone of ceramides and other predominant sphingolipids. Ablation of DES1 from whole animals, or tissue-specific deletion in the liver, and/or adipose tissue resolved hepatic steatosis and insulin resistance in mice caused by leptin deficiency or obesogenic diets. Mechanistic studies revealed new ceramide actions that promoted lipid uptake and storage and impaired glucose utilization, none of which could be recapitulated by (dihydro)ceramides that lacked the critical double bond. These studies suggest that inhibition of DES1 may provide a means of treating hepatic steatosis and cardiometabolic disorders. Overall design: Livers isolated from Control and Liver specific Degs1 knockout mice following either normal chow or high fat diet feeding
Sample: 71-HFD control
SAMN11918192 • SRS4856921 • All experiments • All runs
Organism: Mus musculus
Library:
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: 30-50 mg tissue was homogenized using bullet blender and the lysate was used for the RNA extraction using the RNAeasy kit (Qiagen) as per the manufacturer instructions Illumina TruSeq Stranded RNA Kit with Ribo-Zero Gold
Experiment attributes:
GEO Accession: GSM3840123
Links:
Runs: 1 run, 28.9M spots, 3G bases, 853.3Mb
Run# of Spots# of BasesSizePublished
SRR917205628,931,4513G853.3Mb2020-01-31

ID:
7977255

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