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SRX3940216: GSM3098246: RJ423_miR200a/b/429_rep1; Mus musculus; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 79.3M spots, 19.8G bases, 6.5Gb downloads

Submitted by: NCBI (GEO)
Study: The miR-200b/200a/429 cluster prevents metastasis and induces dormancy in murine claudin-low mammary tumor cells
show Abstracthide Abstract
The miR-200 family of microRNAs consisting of miR-141, miR-200a, miR-200b, miR-200c and miR-429 are key regulators of breast cancer progression. The miR200 family maintains mammary epithelial identity and downregulation of miR-200 expression drives the epithelial-to-mesenchymal transition. Re-expression of one or more miR-200 family members in tumor cells with mesenchymal characteristics may restore the epithelial phenotype and alter growth and metastatic potential. To test this, the miR-200b/200a/429 cluster was re-expressed in a murine claudin-low mammary tumor cell line, RJ423 Overall design: We carried out RNA-Seq on mouse mammary tumor cell lines derived from the MTB-IGFIR mouse model, with either re-expression of the miR200a/b/429 cluster or empty vector control. RNA was isolated from each cell line in 3 independent experiments.
Sample: RJ423_miR200a/b/429_rep1
SAMN08935175 • SRS3171072 • All experiments • All runs
Organism: Mus musculus
Library:
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Total RNA was isolated using the miRVana miRNA isolation kit with Phenol (ThermoFisher). mRNASeq (stranded) using Illumina TrueSeq adapters
Experiment attributes:
GEO Accession: GSM3098246
Links:
Runs: 1 run, 79.3M spots, 19.8G bases, 6.5Gb
Run# of Spots# of BasesSizePublished
SRR700764379,264,33919.8G6.5Gb2018-11-02

ID:
5403359

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