GSM3073008: RNA_C22-EV replicate 2; Mus musculus; RNA-Seq - SRA

SRX3868848: GSM3073008: RNA_C22-EV replicate 2; Mus musculus; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 142.3M spots, 28.4G bases, 3.8Gb downloads

Submitted by: NCBI (GEO)

Study: RNA-sequencing to investigate transcriptional changes caused by ZNF384 fusion proteins in murine pre-B cells

PRJNA448177 • SRP136838 • All experiments • All runs

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RNA-sequencing was performed on Arf-/- pre-B cell expressing either wild-type ZNF384, TAF15-ZNF384, or TCF3-ZNF384. We found that pre-B cells that express ZNF384 fusion proteins have a gene expression profile similar to patients with ZNF384-rearranged leukemia. Overall design: 2 biological replicates of 3 genetically-modified cells lines

Sample: RNA_C22-EV replicate 2

SAMN08824608 • SRS3111878 • All experiments • All runs

Organism: Mus musculus

Library:

Instrument: Illumina NovaSeq 6000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Construction protocol: Total RNA was isolated from GFP+ sorted cells using RNeasy Mini Kit (QIAGEN). Libraries were prepared from total RNA with the TruSeq Stranded Total RNA Library Prep Kit (Illumina.)

Experiment attributes:

GEO Accession: GSM3073008

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 142.3M spots, 28.4G bases, 3.8Gb

Run	# of Spots	# of Bases	Size	Published
SRR6921512	142,304,603	28.4G	3.8Gb	2018-10-18

ID:: 5316622

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