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SRX3776270: GSM3034761: Male_saline_62; Mus musculus; RNA-Seq
1 ILLUMINA (NextSeq 500) run: 7.5M spots, 1.1G bases, 508.5Mb downloads

Submitted by: NCBI (GEO)
Study: Exploiting Mouse Models to Understand Female Hypersensitivity to Cocaine
show Abstracthide Abstract
Male mice, female mice, ovariectomized female mice given placebo pellets, and ovariectomized female mice given extradiol pellets were treated with experimenter-administered saline or cocaine for 7 days, and behaviorally monitored. After a 28 day withdrawal period, RNA samples were prepared from nucleus accumbens and subjected to RNA-Seq, followed by differential expression analyses using Cuffdiff, Limma and DESeq2. Selected transcripts were further investigated using quantitative polymerase chain reaction. Overall design: After surgeries and non-operated controls, mice were administered saline or cocaine, and behaviorally analyzed. After withdrawal from drugs, nucleus accumbens RNA was used for RNA-Seq and qPCR analyses.
Sample: Male_saline_62
SAMN08663385 • SRS3030322 • All experiments • All runs
Organism: Mus musculus
Library:
Instrument: NextSeq 500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Left and right nucleus accumbens punches were extracted in Trizol and processed as per manufacturer's instructions AmpliSeq™ Library PLUS; RNASeq samples were barcoded and all run in a single lane with 9.4 + 4.7 million reads per sample.
Experiment attributes:
GEO Accession: GSM3034761
Links:
Runs: 1 run, 7.5M spots, 1.1G bases, 508.5Mb
Run# of Spots# of BasesSizePublished
SRR68194217,466,6461.1G508.5Mb2018-11-04

ID:
5206661

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