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SRX3723317: GSM3017540: NU_FSU_O1_all_RNAseq; Caenorhabditis elegans; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 44.5M spots, 2.2G bases, 1.5Gb downloads

Submitted by: NCBI (GEO)
Study: Sequencing of Caenorhabditis elegans at 5 different time point after Rotenone and DMSO treatment (mRNA)
show Abstracthide Abstract
Comparison of gene expression profiles from C. elegans at different time points after Rotenone and Dimethylsulfoxid (DMSO) treatment. The RNA-seq data comprise 5 time points (6 hours, 1, 2, 3 and 5 days) treated with Rotenone and DMSO as well as 2 time points (3 and 5 days) with an additional H2O treatment. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de) Overall design: 36 samples in 12 groups: 6 hours DMSO (3 Samples), 6 hours Rotenone (3 Samples), 1 day DMSO (3 Samples), 1 day H2O (3 Samples), 1 day Rotenone (3 Samples), 2 day DMSO (3 Samples), 2 day Rotenone (3 Samples), 3 days DMSO (3 Samples), 3 days Rotenone (3 Samples), 5 days DMSO (3 Samples), 5 days H2O (3 Samples), 5 days Rotenone (3 Samples)
Sample: NU_FSU_O1_all_RNAseq
SAMN08567595 • SRS2980635 • All experiments • All runs
Library:
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Extraction was done as described in Baumgart et al. 2012. (PMID:22487494) Library preparation was done using Illumina's TruSeq RNA Library Preparation Kit v2 following the manufacturer's instruction.
Experiment attributes:
GEO Accession: GSM3017540
Links:
Runs: 1 run, 44.5M spots, 2.2G bases, 1.5Gb
Run# of Spots# of BasesSizePublished
SRR675069944,476,6962.2G1.5Gb2021-10-20

ID:
5137011

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