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SRX331004: GSM1200256: snf2-null - nucleosomes 1; Saccharomyces cerevisiae; MNase-Seq
1 ILLUMINA (Illumina Genome Analyzer II) run: 27.2M spots, 2G bases, 701.6Mb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: Genome-wide nucleosome maps for wild type and Rsc8-depleted Saccharomyces cerevisiae
PRJNA214089 • SRP028411 • All experiments • All runs
show Abstracthide Abstract
Paired-end sequencing study of nucleosomes from MNase-digested nuclei. Overall design: Nucleosomal DNA from wild type and Rsc8-depleted cells was subjected to paired-end sequencing.
Sample: snf2-null - nucleosomes 1
SAMN02299547 • SRS466583 • All experiments • All runs
Organism: Saccharomyces cerevisiae
Library:
Instrument: Illumina Genome Analyzer II
Strategy: MNase-Seq
Source: GENOMIC
Selection: MNase
Layout: PAIRED
Construction protocol: Nuclei were digested with micrococcal nuclease. Mono-nucleosomal DNA was gel-purified. The DNA was repaired using the DNA repair kit from New England Biolabs. The repaired DNA was processed for paired-end sequencing according to the Illumina protocol.
Experiment attributes:
GEO Accession: GSM1200256
Links:
External link:
Runs: 1 run, 27.2M spots, 2G bases, 701.6Mb
Run# of Spots# of BasesSizePublished
SRR94721927,238,8312G701.6Mb2015-07-22

ID:
464310

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